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单细胞和批量测序数据的综合分析描绘了 P2ry12 在缺血再灌注损伤后小胶质细胞中的表达和功能。

Integrative Analysis of Single-Cell and Bulk Sequencing Data Depicting the Expression and Function of P2ry12 in Microglia Post Ischemia-Reperfusion Injury.

机构信息

Department of Pathology, College of Basic Medicine, Chongqing Medical University, Chongqing 400016, China.

Molecular Medicine Diagnostic and Testing Center, Chongqing Medical University, Chongqing 400016, China.

出版信息

Int J Mol Sci. 2023 Apr 5;24(7):6772. doi: 10.3390/ijms24076772.

Abstract

is a microglial marker gene. Recently, increasing evidence has demonstrated that its expression levels can vary in response to different CNS disorders and can affect microglial functions, such as polarization, plasticity, and migration. However, the expression and function of in microglia during ischemia-reperfusion injury (IRI) remain unclear. Here, we developed a computational method to obtain microglia-specific genes (MSPGs) using sequencing data associated with IRI. We evaluated the change in comprehensive expression levels of MSPGs during IRI and compared it to the expression of to determine similarity. Subsequently, the MSPGs were used to explore the functions in microglia through bioinformatics. Moreover, several animal experiments were also conducted to confirm the reliability of the results. The expression of was observed to decrease gradually within 24 h post injury. In response, microglia with reduced expression showed an increase in the expression of one receptor-encoding gene () and three ligand-encoding genes (, , and ). Furthermore, double-labeling immunofluorescence staining revealed that inhibition of P2ry12 blocked microglial migration towards vessels during IRI. Overall, we employ a combined computational and experimental approach to successfully explore expression and function in microglia during IRI.

摘要

是一种小胶质细胞标记基因。最近,越来越多的证据表明,其表达水平可以响应不同的中枢神经系统疾病而变化,并影响小胶质细胞的功能,如极化、可塑性和迁移。然而,在缺血再灌注损伤(IRI)中小胶质细胞中 的表达和功能仍不清楚。在这里,我们使用与 IRI 相关的测序数据开发了一种获得小胶质细胞特异性 基因(MSPGs)的计算方法。我们评估了 MSPGs 在 IRI 过程中的综合表达水平的变化,并与 的表达进行比较,以确定其相似性。随后,使用 MSPGs 通过生物信息学探索小胶质细胞中的 功能。此外,还进行了几项动物实验来验证结果的可靠性。损伤后 24 小时内观察到 的表达逐渐下降。相应地,表达降低的小胶质细胞中一个受体编码基因()和三个配体编码基因(、和)的表达增加。此外,双标记免疫荧光染色显示,P2ry12 抑制可阻断 IRI 期间小胶质细胞向血管的迁移。总之,我们采用了一种结合计算和实验的方法,成功地探索了 IRI 中小胶质细胞中 的表达和功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fc65/10095011/c72a2daffd56/ijms-24-06772-g001.jpg

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