Medical Research Institute, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, 106 Zhongshan Er Road, Yuexiu District, 510080 Guangzhou, China; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, 08003 Barcelona, Spain; Universitat Pompeu Fabra (UPF), Dr Aiguader 88, 08003 Barcelona, Spain; ICREA, Pg. Lluís Companys 23, 08010 Barcelona, Spain.
Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, 08003 Barcelona, Spain.
Cell Rep. 2023 Apr 25;42(4):112361. doi: 10.1016/j.celrep.2023.112361. Epub 2023 Apr 13.
Over the last decades, technological breakthroughs in super-resolution microscopy have allowed us to reach molecular resolution and design experiments of unprecedented complexity. Investigating how chromatin is folded in 3D, from the nucleosome level up to the entire genome, is becoming possible by "magic" (imaging genomic), i.e., the combination of imaging and genomic approaches. This offers endless opportunities to delve into the relationship between genome structure and function. Here, we review recently achieved objectives and the conceptual and technical challenges the field of genome architecture is currently undertaking. We discuss what we have learned so far and where we are heading. We elucidate how the different super-resolution microscopy approaches and, more specifically, live-cell imaging have contributed to the understanding of genome folding. Moreover, we discuss how future technical developments could address remaining open questions.
在过去的几十年里,超分辨率显微镜技术的突破使我们能够达到分子分辨率,并设计出前所未有的复杂实验。通过“魔法”(成像基因组),即成像和基因组方法的结合,研究染色质在 3D 中如何折叠,从核小体水平到整个基因组,成为可能。这为深入研究基因组结构和功能之间的关系提供了无尽的机会。在这里,我们回顾了最近取得的目标以及基因组结构领域目前正在面临的概念和技术挑战。我们讨论了迄今为止我们所学到的内容以及我们的前进方向。我们阐明了不同的超分辨率显微镜方法,特别是活细胞成像,如何有助于理解基因组折叠。此外,我们还讨论了未来的技术发展如何解决仍然存在的问题。