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硫解酶:一种利用辅酶 A-硫酯化学合成和断裂 C-C 键的多功能生物催化剂。

Thiolase: A Versatile Biocatalyst Employing Coenzyme A-Thioester Chemistry for Making and Breaking C-C Bonds.

机构信息

Department of Biochemistry, Albert Einstein College of Medicine, New York, NY, USA.

Faculty of Biochemistry and Molecular Medicine, University of Oulu, Oulu, Finland; email:

出版信息

Annu Rev Biochem. 2023 Jun 20;92:351-384. doi: 10.1146/annurev-biochem-052521-033746. Epub 2023 Apr 17.

Abstract

Thiolases are CoA-dependent enzymes that catalyze the thiolytic cleavage of 3-ketoacyl-CoA, as well as its reverse reaction, which is the thioester-dependent Claisen condensation reaction. Thiolases are dimers or tetramers (dimers of dimers). All thiolases have two reactive cysteines: () a nucleophilic cysteine, which forms a covalent intermediate, and () an acid/base cysteine. The best characterized thiolase is the thiolase, which is a bacterial biosynthetic thiolase belonging to the CT-thiolase subfamily. The thiolase active site is also characterized by two oxyanion holes, two active site waters, and four catalytic loops with characteristic amino acid sequence fingerprints. Three thiolase subfamilies can be identified, each characterized by a unique sequence fingerprint for one of their catalytic loops, which causes unique active site properties. Recent insights concerning the thiolase reaction mechanism, as obtained from recent structural studies, as well as from classical and recent enzymological studies, are addressed, and open questions are discussed.

摘要

硫解酶是一类依赖于辅酶 A 的酶,能够催化 3-酮酰基辅酶 A 的硫解断裂,以及其逆反应,即硫酯依赖性克莱森缩合反应。硫解酶是二聚体或四聚体(二聚体的二聚体)。所有的硫解酶都有两个反应性半胱氨酸:()亲核性半胱氨酸,形成共价中间物,和()酸/碱半胱氨酸。研究最为充分的硫解酶是 硫解酶,它是一种细菌生物合成硫解酶,属于 CT-硫解酶亚家族。硫解酶的活性位点还具有两个阴离子空穴、两个活性位点水以及四个具有特征氨基酸序列指纹的催化环。可以识别出三种硫解酶亚家族,它们各自的一个催化环具有独特的序列指纹,这导致了独特的活性位点性质。本文讨论了最近从结构研究以及经典和现代酶学研究中获得的关于硫解酶反应机制的新见解,并讨论了悬而未决的问题。

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