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核层蛋白 B1 的过表达改变染色质结构和基因表达。

Lamin B1 overexpression alters chromatin organization and gene expression.

机构信息

Molecular and Cell Biology Laboratory, Salk Institute for Biological Studies, La Jolla, CA, USA.

Paul F. Glenn Center for Biology of Aging Research, Salk Institute for Biological Studies, La Jolla, CA, USA.

出版信息

Nucleus. 2023 Dec;14(1):2202548. doi: 10.1080/19491034.2023.2202548.

Abstract

Peripheral heterochromatin positioning depends on nuclear envelope associated proteins and repressive histone modifications. Here we show that overexpression (OE) of Lamin B1 (LmnB1) leads to the redistribution of peripheral heterochromatin into heterochromatic foci within the nucleoplasm. These changes represent a perturbation of heterochromatin binding at the nuclear periphery (NP) through a mechanism independent from altering other heterochromatin anchors or histone post-translational modifications. We further show that LmnB1 OE alters gene expression. These changes do not correlate with different levels of H3K9me3, but a significant number of the misregulated genes were likely mislocalized away from the NP upon LmnB1 OE. We also observed an enrichment of developmental processes amongst the upregulated genes. ~74% of these genes were normally repressed in our cell type, suggesting that LmnB1 OE promotes gene de-repression. This demonstrates a broader consequence of LmnB1 OE on cell fate, and highlights the importance of maintaining proper levels of LmnB1.

摘要

周边异染色质的定位取决于核包膜相关蛋白和抑制性组蛋白修饰。在这里,我们发现 Lamin B1(LmnB1)的过表达(OE)导致周边异染色质重新分布到核质中的异染色质焦点中。这些变化代表了通过一种独立于改变其他异染色质锚定或组蛋白翻译后修饰的机制,干扰了异染色质在核周(NP)的结合。我们进一步表明,LmnB1 OE 改变了基因表达。这些变化与 H3K9me3 的不同水平没有相关性,但大量失调的基因在 LmnB1 OE 后可能从 NP 错位。我们还观察到上调基因中富集了发育过程。在我们的细胞类型中,这些基因中有~74%通常受到抑制,这表明 LmnB1 OE 促进了基因去抑制。这表明 LmnB1 OE 对细胞命运有更广泛的影响,并强调了维持适当 LmnB1 水平的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b56a/10114975/9b40f82716e7/KNCL_A_2202548_F0001_OC.jpg

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