Suppr超能文献

核纤层蛋白B1通过调节基因座的空间定位和染色质相互作用来调控RNA剪接因子的表达。

Lamin B1 regulates RNA splicing factor expression by modulating the spatial positioning and chromatin interactions of the gene locus.

作者信息

Shin Geun-Seup, Jo Ah-Ra, Kim Jinho, Kim Ji-Young, Kim Chul-Hong, An Mi-Jin, Lee Hyun-Min, Park Yuna, Hwangbo Yujeong, Kim Jung-Woong

机构信息

Department of Life Science, Chung-Ang University, Seoul, Republic of Korea.

出版信息

Anim Cells Syst (Seoul). 2025 Feb 15;29(1):149-162. doi: 10.1080/19768354.2025.2465325. eCollection 2025.

Abstract

Lamin B1, a crucial component of the nuclear lamina, plays a pivotal role in chromatin organization and transcriptional regulation in eukaryotic cells. While recent studies have highlighted the connection between Lamin B1 and RNA splicing regulation, the precise molecular mechanisms remain elusive. In this study, we demonstrate that Lamin B1 depletion leads to a global reduction in splicing factor expression, as evidenced by analysis of multiple RNA-seq datasets. Motif analysis suggests that members of the ETS transcription factor family likely bind to the promoter regions of these splicing factors. Further analysis using transcription factor databases and ChIP-seq data identified ETS1 as a key regulator of splicing factor expression. Hi-C sequencing revealed that the loss of Lamin B1 disrupts inter-LAD chromatin interactions near the ETS1 gene locus, resulting in its downregulation. These findings suggest that Lamin B1 indirectly regulates RNA splicing by sustaining proper ETS1 expression, uncovering a novel link between nuclear architecture, gene regulation, and RNA splicing.

摘要

核纤层蛋白B1是核纤层的关键组成部分,在真核细胞的染色质组织和转录调控中发挥着关键作用。虽然最近的研究强调了核纤层蛋白B1与RNA剪接调控之间的联系,但其精确的分子机制仍然难以捉摸。在本研究中,我们证明,通过对多个RNA-seq数据集的分析表明,核纤层蛋白B1的缺失导致剪接因子表达的整体下降。基序分析表明,ETS转录因子家族成员可能与这些剪接因子的启动子区域结合。使用转录因子数据库和ChIP-seq数据进行的进一步分析确定ETS1是剪接因子表达的关键调节因子。Hi-C测序显示,核纤层蛋白B1的缺失破坏了ETS1基因座附近的LAD间染色质相互作用,导致其下调。这些发现表明,核纤层蛋白B1通过维持ETS1的适当表达间接调节RNA剪接,揭示了核结构、基因调控和RNA剪接之间的新联系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5eb0/11834782/d49e16ea1c55/TACS_A_2465325_F0001_OC.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验