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非靶向代谢组学揭示的一种海洋红藻中的隐秘化学变异

Cryptic Chemical Variation in a Marine Red Alga as Revealed by Nontargeted Metabolomics.

作者信息

Khatri Chhetri Bhuwan, Mojib Nazia, Moore Samuel G, Delgadillo David A, Burch Jessica E, Barrett Nolan H, Gaul David A, Marquez Lewis, Soapi Katy, Nelson Hosea M, Quave Cassandra L, Kubanek Julia

机构信息

School of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia 30332, United States.

Center for Microbial Dynamics and Infection, Georgia Institute of Technology, Atlanta, Georgia 30332, United States.

出版信息

ACS Omega. 2023 Apr 6;8(15):13899-13910. doi: 10.1021/acsomega.3c00301. eCollection 2023 Apr 18.

Abstract

Many marine algae occupy habitats that are dark, deep, or encrusted on other organisms and hence are frequently overlooked by natural product chemists. However, exploration of less-studied organisms can lead to new opportunities for drug discovery. Genetic variation at the individual, species, genus, and population levels as well as environmental influences on gene expression enable expansion of the chemical repertoire associated with a taxonomic group, enabling natural product exploration using innovative analytical methods. A nontargeted LC-MS and H NMR spectroscopy-based metabolomic study of 32 collections of representatives of the calcareous red algal genus from coral reef habitats in Fiji and the Solomon Islands revealed significant correlations between natural products' chemistry, phylogeny, and biomedically relevant biological activity. Hierarchical cluster analysis (HCA) of LC-MS data in conjunction with NMR profiling and MS/MS-based molecular networking revealed the presence of at least four distinct algal chemotypes within the genus . Two Fijian collections were prioritized for further analysis, leading to the isolation of three novel sulfated triterpene glycosides with a rearranged isomalabaricane carbon skeleton, guided by the metabolomic data. The discovery of peyssobaricanosides A-C (-) from two Fijian collections, but not from closely related specimens collected in the Solomon Islands that were otherwise chemically and phylogenetically very similar, alludes to population-level variation in secondary metabolite production. Our study reinforces the significance of exploring unusual ecological niches and showcases marine red algae as a chemically rich treasure trove.

摘要

许多海洋藻类栖息于黑暗、深邃或附着在其他生物上的环境中,因此常常被天然产物化学家所忽视。然而,对研究较少的生物进行探索可能会带来药物发现的新机遇。个体、物种、属和种群水平的遗传变异以及环境对基因表达的影响,使得与一个分类群相关的化学物质库得以扩展,从而能够使用创新的分析方法进行天然产物探索。一项基于非靶向液相色谱 - 质谱联用(LC-MS)和核磁共振氢谱(H NMR)光谱的代谢组学研究,对来自斐济和所罗门群岛珊瑚礁栖息地的32个钙质红藻属代表样本进行了分析,结果显示天然产物的化学性质、系统发育和具有生物医学相关性的生物活性之间存在显著相关性。结合核磁共振分析和基于串联质谱(MS/MS)的分子网络技术,对LC-MS数据进行层次聚类分析(HCA),结果表明该属内至少存在四种不同的藻类化学型。两个来自斐济的样本被优先进行进一步分析,在代谢组学数据的指导下,从中分离出了三种具有重排异马拉巴烷碳骨架的新型硫酸化三萜糖苷。从两个斐济样本中发现了佩索巴利卡诺苷A - C(-),但在化学和系统发育上非常相似的所罗门群岛采集的亲缘关系相近的样本中却未发现,这暗示了次级代谢产物产生的种群水平差异。我们的研究强化了探索不寻常生态位的重要性,并展示了海洋红藻是一个化学物质丰富的宝库。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8dd/10116502/57b28e031a26/ao3c00301_0001.jpg

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