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植物化学成分及通过分子模拟支持的多维生物活性特性。

phytochemical composition and multi-dimensional bioactivity properties supported by molecular modeling.

作者信息

Yırtıcı Ümit, Ergene Aysun, Adem Şevki, Atalar Mehmet Nuri, Eyüpoğlu Volkan, Rawat Ravi, Arat Esra, Hamzaoğlu Ergin

机构信息

Department of Medical Laboratory, Kırıkkale University, Kırıkkale, Turkey.

Department of Biology, Kırıkkale University, Kırıkkale, Turkey.

出版信息

J Biomol Struct Dyn. 2024 Mar;42(5):2341-2357. doi: 10.1080/07391102.2023.2204496. Epub 2023 Apr 26.

Abstract

Various studies conducted on species indicate that the relevant plant is good source of bioactive phytochemicals. In this study, studies were used to determine bioactivity properties of methanol extract of - endemic species in Turkey - on extensive basis. Furthermore, the interaction of target molecules, identified for breast cancer and phytochemicals in the extract, was investigated analyses to support findings received . Scutellarin, quercimeritrin, chlorogenic acid and baicalin were primary phytochemicals in the extract. Methanol extract and scutellarin had higher cytotoxic effects against MCF-7 (IC=22.17 µg/mL, and IC=8.25 µM, respectively), compared to other breast cancer cell lines (MDA-MB-231, SKBR-3). The extract had strong antioxidant properties and inhibited target enzymes, especially α-amylase (371.69 mg AKE/g extract). The results of molecular docking indicate that main compounds of extract show high-strength bonding to the c-Kit tyrosine among target molecules identified in breast cancer, compared to other target molecules (MMP-2, MMP-9, VEGFR2 kinase, Aurora-A kinase, HER2). The tyrosinase kinase (1T46)-Scutellarin complex showed considerable stability in 150 ns simulation as per MD findings, and it was coherent with optimal docking findings. Docking findings and HOMO-LUMO analysis results corresponds with experiments. Medicinal properties of phytochemicals, which was determined to be suitable for oral use along with ADMET, were found to be within normal limits except for their polarity properties. In conclusion, and studies indicated that the relevant plant yields promising results regarding its potential to develop novel and effective medicational products.Communicated by Ramaswamy H. Sarma.

摘要

对该物种进行的多项研究表明,相关植物是生物活性植物化学物质的良好来源。在本研究中,广泛开展了各项研究以确定土耳其特有的[植物名称未提及]物种甲醇提取物的生物活性特性。此外,通过分析研究提取物中已鉴定出的针对乳腺癌的靶分子与植物化学物质之间的相互作用,以支持所获得的研究结果。提取物中的主要植物化学物质为野黄芩苷、槲皮苷、绿原酸和黄芩苷。与其他乳腺癌细胞系(MDA - MB - 231、SKBR - 3)相比,甲醇提取物和野黄芩苷对MCF - 7具有更高的细胞毒性作用(IC分别为22.17μg/mL和8.25μM)。该提取物具有很强的抗氧化性能,并能抑制靶标酶,尤其是α - 淀粉酶(371.69mg AKE/g提取物)。分子对接结果表明,与其他靶标分子(MMP - 2、MMP - 9、VEGFR2激酶、Aurora - A激酶、HER2)相比,提取物的主要化合物与乳腺癌中鉴定出的靶标分子中的c - Kit酪氨酸显示出高强度结合。根据分子动力学研究结果,酪氨酸激酶(1T46) - 野黄芩苷复合物在150ns模拟中显示出相当的稳定性,这与最佳对接结果一致。对接结果和HOMO - LUMO分析结果与[实验未提及]实验相符。除极性特性外,经测定适合口服并结合ADMET的植物化学物质的药用特性在正常范围内。总之,[研究未提及]研究表明,相关植物在开发新型有效药物产品方面具有广阔前景。由Ramaswamy H. Sarma传达。

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