Nantong University Medical College, 226006, China.
Department of Radiation Oncology, Nantong Tumor Hospital, Affiliated Tumor Hospital of Nantong University, 226006, China.
Biomed Res Int. 2023 Apr 17;2023:4019091. doi: 10.1155/2023/4019091. eCollection 2023.
Non-small-cell lung cancer (NSCLC) is a major health problem that endangers human health. The prognosis of radiotherapy or chemotherapy is still unsatisfactory. This study is aimed at investigating the predictive value of glycolysis-related genes (GRGs) on the prognosis of NSCLC patients with radiotherapy or chemotherapy.
Download the clinical information and RNA data of NSCLC patients receiving radiotherapy or chemotherapy from TCGA and geo databases and obtain GRGs from MsigDB. The two clusters were identified by consistent cluster analysis, the potential mechanism was explored by KEGG and GO enrichment analyses, and the immune status was evaluated by estimate, TIMER, and quanTIseq algorithms. Lasso algorithm is used to build the corresponding prognostic risk model.
Two clusters with different GRG expression were identified. The high-expression subgroup had poor overall survival. The results of KEGG and GO enrichment analyses suggest that the differential genes of the two clusters are mainly reflected in metabolic and immune-related pathways. The risk model constructed with GRGs can effectively predict the prognosis. The nomogram combined with the model and clinical characteristics has good clinical application potential.
In this study, we found that GRGs are associated with tumor immune status and can assess the prognosis of NSCLC patients receiving radiotherapy or chemotherapy.
非小细胞肺癌(NSCLC)是危害人类健康的重大健康问题。放疗或化疗的预后仍然不尽人意。本研究旨在探讨糖酵解相关基因(GRGs)对接受放疗或化疗的 NSCLC 患者预后的预测价值。
从 TCGA 和 geo 数据库中下载接受放疗或化疗的 NSCLC 患者的临床信息和 RNA 数据,并从 MsigDB 中获取 GRGs。通过一致聚类分析确定两个聚类,通过 KEGG 和 GO 富集分析探讨潜在机制,并通过 estimate、TIMER 和 quanTIseq 算法评估免疫状态。使用 Lasso 算法构建相应的预后风险模型。
鉴定出两个具有不同 GRG 表达的聚类。高表达亚组的总生存期较差。KEGG 和 GO 富集分析的结果表明,两个聚类的差异基因主要反映在代谢和免疫相关途径中。使用 GRGs 构建的风险模型可有效预测预后。结合模型和临床特征的列线图具有良好的临床应用潜力。
本研究发现,GRGs 与肿瘤免疫状态相关,可评估接受放疗或化疗的 NSCLC 患者的预后。