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利用蛋白质组学方法深入了解普通章鱼()墨囊蛋白质组和生物活性肽。

Insights into Common Octopus () Ink Proteome and Bioactive Peptides Using Proteomic Approaches.

机构信息

Instituto de Investigaciones Marinas (IIM), CSIC. Eduardo Cabello 6, 36208 Vigo, Spain.

出版信息

Mar Drugs. 2023 Mar 24;21(4):206. doi: 10.3390/md21040206.

Abstract

The common octopus () is nowadays the most demanded cephalopod species for human consumption. This species was also postulated for aquaculture diversification to supply its increasing demand in the market worldwide, which only relies on continuously declining field captures. In addition, they serve as model species for biomedical and behavioral studies. Body parts of marine species are usually removed before reaching the final consumer as by-products in order to improve preservation, reduce shipping weight, and increase product quality. These by-products have recently attracted increasing attention due to the discovery of several relevant bioactive compounds. Particularly, the common octopus ink has been described as having antimicrobial and antioxidant properties, among others. In this study, the advanced proteomics discipline was applied to generate a common octopus reference proteome to screen potential bioactive peptides from fishing discards and by-products such as ink. A shotgun proteomics approach by liquid chromatography coupled with tandem mass spectrometry (LC-MS/MS) using an Orbitrap Elite instrument was used to create a reference dataset from octopus ink. A total of 1432 different peptides belonging to 361 non-redundant annotated proteins were identified. The final proteome compilation was investigated by integrated in silico studies, including gene ontology (GO) term enrichment, pathways, and network studies. Different immune functioning proteins involved in the innate immune system, such as ferritin, catalase, proteasome, Cu/Zn superoxide dismutase, calreticulin, disulfide isomerase, heat shock protein, etc., were found in ink protein networks. Additionally, the potential of bioactive peptides from octopus ink was addressed. These bioactive peptides can exert beneficial health properties such as antimicrobial, antioxidant, antihypertensive, and antitumoral properties and are therefore considered lead compounds for developing pharmacological, functional foods or nutraceuticals.

摘要

普通章鱼()是当今人类食用需求最大的头足类动物。为了满足全球市场不断增长的需求,同时减少对不断减少的野外捕捞的依赖,该物种也被提出用于水产养殖多样化。此外,它们还被用作生物医学和行为研究的模式生物。为了提高保存效果、减少运输重量和提高产品质量,海洋物种的身体部位通常在到达最终消费者之前就作为副产品被去除。这些副产品最近由于发现了几种相关的生物活性化合物而引起了越来越多的关注。特别是,普通章鱼墨已被描述具有抗菌和抗氧化等特性。在这项研究中,先进的蛋白质组学学科被应用于生成普通章鱼参考蛋白质组,以从捕鱼废弃物和副产品(如墨)中筛选潜在的生物活性肽。使用 Orbitrap Elite 仪器的液相色谱-串联质谱(LC-MS/MS)进行的 shotgun 蛋白质组学方法用于从章鱼墨中创建参考数据集。共鉴定出 1432 种不同的肽,属于 361 种非冗余注释蛋白。最终的蛋白质组综合分析通过包括基因本体(GO)术语富集、途径和网络研究的综合计算机研究进行调查。在墨蛋白网络中发现了参与先天免疫系统的不同免疫功能蛋白,如铁蛋白、过氧化氢酶、蛋白酶体、Cu/Zn 超氧化物歧化酶、钙网蛋白、二硫键异构酶、热休克蛋白等。此外,还探讨了章鱼墨中生物活性肽的潜力。这些生物活性肽具有抗菌、抗氧化、降压和抗肿瘤等有益健康的特性,因此被认为是开发药理学、功能性食品或营养保健品的先导化合物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a469/10142993/d281bc7cb93b/marinedrugs-21-00206-g001.jpg

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