Karnachuk Olga V, Beletsky Alexey V, Rakitin Andrey L, Ikkert Olga P, Avakyan Marat R, Zyusman Viacheslav S, Napilov Andrei, Mardanov Andrey V, Ravin Nikolai V
Laboratory of Biochemistry and Molecular Biology, Tomsk State University, 634050 Tomsk, Russia.
Institute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences, Leninsky Prosp, Bld. 33-2, 119071 Moscow, Russia.
Microorganisms. 2023 Mar 25;11(4):838. doi: 10.3390/microorganisms11040838.
Sulphate-reducing bacteria, primarily , are responsible for the active generation of HS in swine production waste. The model species for sulphate reduction studies, strain L2, was previously isolated from swine manure characterized by high rates of dissimilatory sulphate reduction. The source of electron acceptors in low-sulphate swine waste for the high rate of HS formation remains uncertain. Here, we demonstrate the ability of the L2 strain to use common animal farming supplements including L-lysine-sulphate, gypsum and gypsum plasterboards as electron acceptors for HS production. Genome sequencing of strain L2 revealed the presence of two megaplasmids and predicted resistance to various antimicrobials and mercury, which was confirmed in physiological experiments. Most of antibiotic resistance genes (ARG) are carried by two class 1 integrons located on the chromosome and on the plasmid pDsulf-L2-2. These ARGs, predicted to confer resistance to beta-lactams, aminoglycosides, lincosamides, sulphonamides, chloramphenicol and tetracycline, were probably laterally acquired from various and . Resistance to mercury is likely enabled by two operons also located on the chromosome and on pDsulf-L2-2 and acquired via horizontal gene transfer. The second megaplasmid, pDsulf-L2-1, encoded nitrogenase, catalase and type III secretion system suggesting close contact of the strain with intestinal cells in the swine gut. The location of ARGs on mobile elements allows us to consider strain L2 as a possible vector transferring antimicrobials resistance determinants between the gut microbiote and microbial communities in environmental biotopes.
主要是硫酸盐还原菌负责在猪生产废物中活跃地生成硫化氢。用于硫酸盐还原研究的模式菌株L2,先前是从具有高异化硫酸盐还原率特征的猪粪中分离出来的。低硫酸盐猪废物中高硫化氢形成速率的电子受体来源仍不确定。在这里,我们证明了L2菌株能够利用包括L - 赖氨酸硫酸盐、石膏和石膏板在内的常见动物养殖补充剂作为硫化氢产生的电子受体。L2菌株的基因组测序揭示了存在两个大质粒,并预测其对各种抗菌剂和汞具有抗性,这在生理实验中得到了证实。大多数抗生素抗性基因(ARG)由位于染色体和质粒pDsulf - L2 - 2上的两个1类整合子携带。这些ARG预计对β - 内酰胺类、氨基糖苷类、林可酰胺类、磺胺类、氯霉素和四环素具有抗性,可能是从各种……横向获得的。对汞的抗性可能由同样位于染色体和pDsulf - L2 - 2上并通过水平基因转移获得的两个汞操纵子实现。第二个大质粒pDsulf - L2 - 1编码固氮酶、过氧化氢酶和III型分泌系统,表明该菌株与猪肠道中的肠道细胞有密切接触。ARG在移动元件上的位置使我们能够将L2菌株视为在肠道微生物群和环境生物群落中的微生物群落之间转移抗菌抗性决定因素的可能载体。