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水通道蛋白组学:多尿症中 aquaporin-2 缺失的机制。

'Aquaporin-omics': mechanisms of aquaporin-2 loss in polyuric disorders.

机构信息

Epithelial Systems Biology Laboratory, Systems Biology Center, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, MD, USA.

Division of Nephrology, Department of Medicine, Tri-Service General Hospital, National Defense Medical Center, Taipei, Taiwan.

出版信息

J Physiol. 2024 Jul;602(13):3191-3206. doi: 10.1113/JP284634. Epub 2023 May 11.

Abstract

Animal models of a variety of acquired nephrogenic diabetes insipidus (NDI) disorders have identified a common feature: all such models are associated with the loss of aquaporin-2 (AQP2) from collecting duct principal cells, explaining the associated polyuria. To discover mechanisms of AQP2 loss, previous investigators have carried out either transcriptomics (lithium-induced NDI, unilateral ureteral obstruction, endotoxin-induced NDI) or proteomics (hypokalaemia-associated NDI, hypercalcaemia-associated NDI, bilateral ureteral obstruction), yielding contrasting views. Here, to address whether there may be common mechanisms underlying loss of AQP2 in acquired NDI disorders, we have used bioinformatic data integration techniques to combine information from all transcriptomic and proteomic data sets. The analysis reveals roles for autophagy/apoptosis, oxidative stress and inflammatory signalling as key elements of the mechanism that results in loss of AQP2. These processes can cause AQP2 loss through the combined effects of repression of Aqp2 gene transcription, generalized translational repression, and increased autophagic degradation of proteins including AQP2. Two possible types of stress-sensor proteins, namely death receptors and stress-sensitive protein kinases of the EIF2AK family, are discussed as potential triggers for signalling processes that result in loss of AQP2. KEY POINTS: Prior studies have shown in a variety of animal models of acquired nephrogenic diabetes insipidus (NDI) that loss of the aquaporin-2 (AQP2) protein is a common feature. Investigations of acquired NDI using transcriptomics (RNA-seq) and proteomics (protein mass spectrometry) have led to differing conclusions regarding mechanisms of AQP2 loss. Bioinformatic integration of transcriptomic and proteomic data from these prior studies now reveals that acquired NDI models map to three core processes: oxidative stress, apoptosis/autophagy and inflammatory signalling. These processes cause loss of AQP2 through translational repression, accelerated degradation of proteins, and transcriptional repression.

摘要

各种获得性肾性尿崩症 (NDI) 动物模型的研究表明,所有这些模型都有一个共同特征:即集合管主细胞中的水通道蛋白-2 (AQP2) 丢失,从而导致多尿。为了发现 AQP2 丢失的机制,先前的研究人员已经进行了转录组学(锂诱导的 NDI、单侧输尿管梗阻、内毒素诱导的 NDI)或蛋白质组学(低钾血症相关的 NDI、高钙血症相关的 NDI、双侧输尿管梗阻)研究,得出了相互矛盾的观点。在这里,为了研究是否存在获得性 NDI 疾病中 AQP2 丢失的共同机制,我们使用了生物信息学数据整合技术,将所有转录组和蛋白质组数据集的信息结合起来。分析结果揭示了自噬/凋亡、氧化应激和炎症信号作为导致 AQP2 丢失的机制的关键因素。这些过程可以通过抑制 Aqp2 基因转录、普遍的翻译抑制以及包括 AQP2 在内的蛋白质的自噬降解的综合作用导致 AQP2 丢失。两种可能的应激传感器蛋白,即死亡受体和 EIF2AK 家族的应激敏感蛋白激酶,被认为是导致 AQP2 丢失的信号转导过程的潜在触发因素。关键点:先前的研究表明,在各种获得性肾性尿崩症 (NDI) 的动物模型中,水通道蛋白-2 (AQP2) 蛋白的丢失是一个共同特征。使用转录组学 (RNA-seq) 和蛋白质组学 (蛋白质质谱) 研究获得性 NDI 导致了对 AQP2 丢失机制的不同结论。对这些先前研究的转录组学和蛋白质组学数据进行生物信息学整合,现在揭示了获得性 NDI 模型与三个核心过程相关:氧化应激、凋亡/自噬和炎症信号。这些过程通过翻译抑制、蛋白质加速降解和转录抑制导致 AQP2 丢失。

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本文引用的文献

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Proteomics and AQP2 regulation.蛋白质组学与 AQP2 调节。
J Physiol. 2024 Jul;602(13):3011-3023. doi: 10.1113/JP283899. Epub 2023 Jan 12.
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Bayesian identification of candidate transcription factors for the regulation of gene expression.贝叶斯识别调控基因表达的候选转录因子。
Am J Physiol Renal Physiol. 2021 Sep 1;321(3):F389-F401. doi: 10.1152/ajprenal.00204.2021. Epub 2021 Jul 26.

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