Department of Radiotherapy, University Medical Center Utrecht, Utrecht, the Netherlands.
Department of Pathology, University Medical Center Utrecht, Utrecht, the Netherlands.
Mod Pathol. 2023 Aug;36(8):100199. doi: 10.1016/j.modpat.2023.100199. Epub 2023 Apr 26.
Haralick texture features are used to quantify the spatial distribution of signal intensities within an image. In this study, the heterogeneity of proliferation (Ki-67 expression) and immune cells (CD45 expression) within tumors was quantified and used to classify histologic characteristics of larynx and hypopharynx carcinomas. Of 21 laryngectomy specimens, 74 whole-mount tumor slides were scored on histologic characteristics. Ki-67 and CD45 immunohistochemistry was performed, and all sections were digitized. The tumor area was annotated in QuPath. Haralick features independent of the diaminobenzidine intensity were extracted from the isolated diaminobenzidine signal to quantify intratumor heterogeneity. Haralick features from both Ki-67 and CD45 were used as input for a principal component analysis. A linear support vector machine was fitted to the first 4 principal components for classification and validated with a leave-one-patient-out cross-validation method. Significant differences in individual Haralick features were found between cohesive and noncohesive tumors for CD45 (angular second motion: P =.03, inverse difference moment: P =.009, and entropy: P =.02) and between the larynx and hypopharynx tumors for both CD45 (angular second motion: P =.03, inverse difference moment: P =.007, and entropy: P =.005) and Ki-67 (correlation: P =.003). Therefore, these features were used for classification. The linear classifier resulted in a classification accuracy of 85% for site of origin and 81% for growth pattern. A leave-one-patient-out cross-validation resulted in an error rate of 0.27 and 0.35 for both classifiers, respectively. In conclusion, we show a method to quantify intratumor heterogeneity of immunohistochemistry biomarkers using Haralick features. This study also shows the feasibility of using these features to classify tumors by histologic characteristics. The classifiers created in this study are a proof of concept because more data are needed to create robust classifiers, but the method shows potential for automated tumor classification.
Haralick 纹理特征用于量化图像中信号强度的空间分布。在这项研究中,量化了肿瘤内增殖(Ki-67 表达)和免疫细胞(CD45 表达)的异质性,并将其用于分类喉和下咽癌的组织学特征。在 21 个喉切除术标本中,74 个全肿瘤切片根据组织学特征进行评分。进行了 Ki-67 和 CD45 的免疫组织化学染色,并且所有切片均进行了数字化。在 QuPath 中对肿瘤区域进行注释。从分离的二氨基联苯胺信号中提取与二氨基联苯胺强度无关的 Haralick 特征,以量化肿瘤内异质性。将 Ki-67 和 CD45 的 Haralick 特征用作主成分分析的输入。使用线性支持向量机对前 4 个主成分进行拟合,然后使用患者留一法交叉验证方法进行验证。对于 CD45,在凝聚性和非凝聚性肿瘤之间发现了个体 Haralick 特征的差异(角二阶矩:P =.03,逆差矩:P =.009,和熵:P =.02),并且在喉和下咽肿瘤之间发现了差异(角二阶矩:P =.03,逆差矩:P =.007,和熵:P =.005)和 Ki-67(相关性:P =.003)。因此,这些特征用于分类。线性分类器对起源部位的分类准确率为 85%,对生长方式的分类准确率为 81%。患者留一法交叉验证的错误率分别为 0.27 和 0.35。总之,我们展示了一种使用 Haralick 特征量化免疫组织化学生物标志物肿瘤内异质性的方法。这项研究还表明,使用这些特征根据组织学特征对肿瘤进行分类是可行的。本研究中创建的分类器只是一个概念证明,因为需要更多的数据来创建稳健的分类器,但该方法显示出用于自动肿瘤分类的潜力。