Kumar Sunil, Behera Santosh Kumar, Gururaj Kumaresan, Chaurasia Anurag, Murmu Sneha, Prabha Ratna, Angadi U B, Pawaiya Rajveer Singh, Rai Anil
ICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.
National Institute of Pharmaceutical Education and Research, Ahmedabad, India.
J Biomol Struct Dyn. 2024 Mar;42(5):2257-2269. doi: 10.1080/07391102.2023.2204362. Epub 2023 May 2.
Enterotoxaemia (ET) is a severe disease that affects domestic ruminants, including sheep and goats, and is caused by type B and D strains. The disease is characterized by the production of Epsilon toxin (ETX), which has a significant impact on the farming industry due to its high lethality. The binding of ETX to the host cell receptor is crucial, but still poorly understood. Therefore, the structural features of goat Myelin and lymphocytic (MAL) protein were investigated and defined in this study. We induced the mutations in aromatic amino acid residues of ETX and substituted them with aliphatic residues at domains I and II. Subsequently, protein-protein interactions (PPI) were performed between ETX (wild)-MAL and ETX (mutated)-MAL protein predicting the domain sites of ETX structure. Further, molecular dynamics (MD) simulation studies were performed for both complexes to investigate the dynamic behavior of the proteins. The binding efficiency between 'ETX (wild)-MAL protein' and 'ETX (mutated)-MAL protein complex' interactions were compared and showed that the former had stronger interactions and binding efficiency due to the higher stability of the complex. The MD analysis showed destabilization and higher fluctuations in the PPI of the mutated heterodimeric ETX-MAL complex which is otherwise essential for its functional conformation. Such kind of interactions with mutated functional domains of ligands provided much-needed clarity in understanding the pre-pore complex formation of epsilon toxin with the MAL protein receptor of goats. The findings from this study would provide an impetus for designing a novel vaccine for Enterotoxaemia in goats.Communicated by Ramaswamy H. Sarma.
肠毒血症(ET)是一种严重影响包括绵羊和山羊在内的家养反刍动物的疾病,由B型和D型菌株引起。该疾病的特征是产生ε毒素(ETX),由于其高致死率,对养殖业有重大影响。ETX与宿主细胞受体的结合至关重要,但仍知之甚少。因此,本研究对山羊髓鞘和淋巴细胞(MAL)蛋白的结构特征进行了研究和定义。我们诱导ETX芳香族氨基酸残基发生突变,并在结构域I和II处用脂肪族残基进行取代。随后,在ETX(野生型)-MAL和ETX(突变型)-MAL蛋白之间进行蛋白质-蛋白质相互作用(PPI),预测ETX结构的结构域位点。此外,对两种复合物都进行了分子动力学(MD)模拟研究,以研究蛋白质的动态行为。比较了“ETX(野生型)-MAL蛋白”和“ETX(突变型)-MAL蛋白复合物”相互作用之间的结合效率,结果表明,由于复合物具有更高的稳定性,前者具有更强的相互作用和结合效率。MD分析表明,突变的异二聚体ETX-MAL复合物的PPI不稳定且波动较大,而这对其功能构象至关重要。与配体突变功能域的这种相互作用为理解ε毒素与山羊MAL蛋白受体形成孔前复合物提供了急需的清晰认识。本研究结果将为设计一种新型山羊肠毒血症疫苗提供动力。由拉马斯瓦米·H·萨尔马传达。