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鉴定和表征来源于海藻共生菌 Microbulbifer sp. YNDZ01 的 ι-卡拉胶酶。

Identification and characterization of ι-carrageenase from macroalgae-associated bacterium Microbulbifer sp. YNDZ01.

机构信息

Key Lab of Ecological Environment Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao, China.

College of Chemical Engineering, Qingdao University of Science & Technology, Qingdao, China.

出版信息

J Sci Food Agric. 2023 Sep;103(12):6095-6104. doi: 10.1002/jsfa.12705. Epub 2023 May 31.

DOI:10.1002/jsfa.12705
PMID:37209381
Abstract

BACKGROUND

In the present study, the ι-carrageenase gene, Car1293, was obtained from the genome of Microbulbifer sp. YNDZ01, which was isolated from the surface of macroalgae. To date, there are few studies on ι-carrageenase and the anti-inflammatory activity of ι-carrageenan oligosaccharides (CGOS). To enhance our perspective on ι-carrageenase and ι-carrageen oligosaccharides, the sequence, protein structure, enzymatic properties, enzymatic digestion products and anti-inflammatory activity of the gene were investigated.

RESULTS

The gene length of Car1293 is 2,589 bp, encoding an enzyme with 862 amino acids, which shares 34% similarity with any previously reported ι-carrageenase. The spatial structure of Car1293 consists of many α-helices with a β-fold binding module located at its terminus, and eight binding sites were found in the binding module as a result of docking with CGOS-DP4 ligand. The optimum temperature and pH for the activity of recombinant Car1293 toward ι-carrageenan were 50 °C and 6.0, respectively. The hydrolysates of Car1293 are mainly degree of polymerization (DP)8, with minor products showing DP2, DP4, and DP6. The enzymatic hydrolysates CGOS-DP8 showed prominent anti-inflammatory activity, which was greater than that of the positive control l-monomethylarginine in lipopolysaccharide-induced RAW264.7 macrophages. It inhibited nitric oxide production, as well as significantly inhibited tumor necrosis factor-α and interleukin-6 secretion.

CONCLUSION

The ι-carrageenase sequence encoded by Car1293 is novel and can hydrolyze carrageenan into CGOS-DP8 that has a significant anti-inflammatory effect. The present study fills a gap in the research on the biological activity of oligosaccharides in ι-carrageenan and provides promising data for the development of natural anti-inflammatory agent. © 2023 Society of Chemical Industry.

摘要

背景

本研究从分离自大型海藻表面的微球藻属 YNDZ01 基因组中获得 ι-卡拉胶酶基因 Car1293。迄今为止,关于 ι-卡拉胶酶和 ι-卡拉胶低聚糖(CGOS)的抗炎活性研究较少。为了更深入地了解 ι-卡拉胶酶和 ι-卡拉胶低聚糖,对该基因的序列、蛋白质结构、酶学性质、酶解产物和抗炎活性进行了研究。

结果

Car1293 基因长度为 2589bp,编码的酶含有 862 个氨基酸,与任何先前报道的 ι-卡拉胶酶的相似度为 34%。Car1293 的空间结构由许多α-螺旋组成,其末端有一个β-折叠结合模块,通过与 CGOS-DP4 配体对接,在结合模块中发现了 8 个结合位点。重组 Car1293 对 ι-卡拉胶的最适温度和 pH 值分别为 50°C 和 6.0。Car1293 的水解产物主要为聚合度(DP)8,少量产物为 DP2、DP4 和 DP6。酶解产物 CGOS-DP8 表现出显著的抗炎活性,优于阳性对照 LPS 诱导的 RAW264.7 巨噬细胞中的 l-单甲基精氨酸。它抑制一氧化氮的产生,显著抑制肿瘤坏死因子-α和白细胞介素-6 的分泌。

结论

Car1293 编码的 ι-卡拉胶酶序列是新颖的,可以将卡拉胶水解成具有显著抗炎作用的 CGOS-DP8。本研究填补了 ι-卡拉胶中寡糖生物活性研究的空白,为天然抗炎剂的开发提供了有前景的数据。© 2023 化学工业协会。

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