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MAPK/ERK 通道的容量超过 6 比特/小时。

The MAPK/ERK channel capacity exceeds 6 bit/hour.

机构信息

Institute of Fundamental Technological Research, Polish Academy of Sciences, Warsaw, Poland.

Institute of Cell Biology, University of Bern, Bern, Switzerland.

出版信息

PLoS Comput Biol. 2023 May 22;19(5):e1011155. doi: 10.1371/journal.pcbi.1011155. eCollection 2023 May.

Abstract

Living cells utilize signaling pathways to sense, transduce, and process information. As the extracellular stimulation often has rich temporal characteristics which may govern dynamic cellular responses, it is important to quantify the rate of information flow through the signaling pathways. In this study, we used an epithelial cell line expressing a light-activatable FGF receptor and an ERK activity reporter to assess the ability of the MAPK/ERK pathway to transduce signal encoded in a sequence of pulses. By stimulating the cells with random light pulse trains, we demonstrated that the MAPK/ERK channel capacity is at least 6 bits per hour. The input reconstruction algorithm detects the light pulses with 1-min accuracy 5 min after their occurrence. The high information transmission rate may enable the pathway to coordinate multiple processes including cell movement and respond to rapidly varying stimuli such as chemoattracting gradients created by other cells.

摘要

活细胞利用信号通路来感知、转导和处理信息。由于细胞外刺激通常具有丰富的时间特征,这些特征可能控制着动态的细胞反应,因此量化信号通路中信息流的速率非常重要。在这项研究中,我们使用表达光激活的 FGF 受体和 ERK 活性报告基因的上皮细胞系来评估 MAPK/ERK 通路在传递编码在一系列脉冲中的信号的能力。通过用随机光脉冲序列刺激细胞,我们证明 MAPK/ERK 通道的容量至少为每小时 6 位。输入重构算法可以在光脉冲发生后 5 分钟内以 1 分钟的精度检测到光脉冲。高信息传输率可能使该通路能够协调多个过程,包括细胞运动,并对快速变化的刺激做出反应,例如由其他细胞产生的趋化性梯度。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e770/10237675/19723aa8915c/pcbi.1011155.g001.jpg

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