Nałęcz-Jawecki Paweł, Roth Lee, Grabowski Frederic, Li Sunnie, Kochańczyk Marek, Bugaj Lukasz J, Lipniacki Tomasz
Institute of Fundamental Technological Research, Polish Academy of Sciences, Warsaw, Poland.
Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, 19104, USA.
bioRxiv. 2025 May 5:2025.04.30.651439. doi: 10.1101/2025.04.30.651439.
Signaling pathways transmit and process information, enabling cells to respond accurately to external cues. Disease states like cancer can corrupt signal transmission, though the magnitude to which they reduce information capacity has not been quantified. Here we apply pseudo-random pulsatile optogenetic stimulation, live-cell imaging, and information theory to compare the information capacity of receptor tyrosine kinase (RTK) signaling pathways in EML4-ALK-driven lung cancer cells (STE-1) and non-transformed lung epithelial cells (BEAS-2B). The information rate through the RTK/ERK pathway in STE-1 cells was below 0.5 bit/hour but increased to 3 bit/hour after oncogene inhibition. Information was transmitted by only 50-70% of cells, whose channel capacity (maximum information rate) was estimated through protocol optimization. Although oncogene inhibition increased the capacity of the RTK/ERK pathway in STE-1 cells (6 bit/hour), capacity remained lower than in BEAS-2B (11 bit/hour). The capacity of the parallel RTK/calcineurin pathway in BEAS-2B exceeded 15 bit/hour. This study highlights information capacity as a sensitive metric for identifying disease-associated dysfunction and evaluating effects of targeted interventions.
信号通路传递和处理信息,使细胞能够准确响应外部信号。像癌症这样的疾病状态会破坏信号传递,不过它们降低信息容量的程度尚未得到量化。在此,我们应用伪随机脉冲光遗传学刺激、活细胞成像和信息理论,来比较在EML4-ALK驱动的肺癌细胞(STE-1)和未转化的肺上皮细胞(BEAS-2B)中受体酪氨酸激酶(RTK)信号通路的信息容量。STE-1细胞中通过RTK/ERK通路的信息速率低于0.5比特/小时,但在癌基因抑制后增加到3比特/小时。只有50%-70%的细胞能传递信息,其通道容量(最大信息速率)通过方案优化进行估计。尽管癌基因抑制增加了STE-1细胞中RTK/ERK通路的容量(6比特/小时),但仍低于BEAS-2B细胞(11比特/小时)。BEAS-2B中平行的RTK/钙调神经磷酸酶通路的容量超过15比特/小时。这项研究强调信息容量是识别疾病相关功能障碍和评估靶向干预效果的一个敏感指标。