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生物神经网络中拓扑结构的内在相似性

The Intrinsic Similarity of Topological Structure in Biological Neural Networks.

作者信息

Zhao Hongfei, Shao Cunqi, Shi Zhiguo, He Shibo, Gong Zhefeng

出版信息

IEEE/ACM Trans Comput Biol Bioinform. 2023 Sep-Oct;20(5):3292-3305. doi: 10.1109/TCBB.2023.3279443. Epub 2023 Oct 9.

Abstract

Most previous studies mainly have focused on the analysis of structural properties of individual neuronal networks from C. elegans. In recent years, an increasing number of synapse-level neural maps, also known as biological neural networks, have been reconstructed. However, it is not clear whether there are intrinsic similarities of structural properties of biological neural networks from different brain compartments or species. To explore this issue, we collected nine connectomes at synaptic resolution including C. elegans, and analyzed their structural properties. We found that these biological neural networks possess small-world properties and modules. Excluding the Drosophila larval visual system, these networks have rich clubs. The distributions of synaptic connection strength for these networks can be fitted by the truncated pow-law distributions. Additionally, compared with the power-law model, a log-normal distribution is a better model to fit the complementary cumulative distribution function (CCDF) of degree for these neuronal networks. Moreover, we also observed that these neural networks belong to the same superfamily based on the significance profile (SP) of small subgraphs in the network. Taken together, these findings suggest that biological neural networks share intrinsic similarities in their topological structure, revealing some principles underlying the formation of biological neural networks within and across species.

摘要

以往大多数研究主要集中于对秀丽隐杆线虫单个神经元网络结构特性的分析。近年来,越来越多的突触水平神经图谱,也被称为生物神经网络,已被重建。然而,尚不清楚来自不同脑区或物种的生物神经网络在结构特性上是否存在内在相似性。为探究这一问题,我们收集了包括秀丽隐杆线虫在内的九个突触分辨率的连接组,并分析了它们的结构特性。我们发现这些生物神经网络具有小世界特性和模块。除果蝇幼虫视觉系统外,这些网络具有丰富俱乐部。这些网络的突触连接强度分布可以用截断幂律分布来拟合。此外,与幂律模型相比,对数正态分布是拟合这些神经元网络度的互补累积分布函数(CCDF)的更好模型。而且,基于网络中小子图的显著性轮廓(SP),我们还观察到这些神经网络属于同一超家族。综上所述,这些发现表明生物神经网络在拓扑结构上具有内在相似性,揭示了物种内和物种间生物神经网络形成的一些潜在原则。

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