Laboratory of Microbiology, Wageningen University & Research, Stippeneng 4, 6708WE Wageningen, Netherlands.
Int J Syst Evol Microbiol. 2023 May;73(5). doi: 10.1099/ijsem.0.005905.
Strain AMP has been previously suggested as a strain of the species Jiang . 2009 (based on the high 16S rRNA gene identity, 98.3 %). However, genome-based phylogenetic analysis of strain AMP reveals that this bacterium is in fact a novel species of the genus . Genome relatedness indices between strain AMP and DSM 521 were below the minimum threshold values required to consider them members of the same species (digital DNA-DNA hybridization, 52.2 % (<70%); average nucleotide identity, 93.2 % (<95%)). Based on phylogenetic and phenotypic results we recommend that strain AMP (DSM 21394=JCM 35360) should be classified as representing new species, for which we propose the name sp. nov.
AMP 菌株先前被认为是 Jiang 属的一个菌株。2009 年(基于高 16S rRNA 基因同一性,98.3%)。然而,基于 AMP 菌株的全基因组系统发育分析表明,该细菌实际上是 Jiang 属的一个新种。AMP 菌株和 DSM 521 之间的基因组相关指数低于被认为是同一物种的最低阈值(数字 DNA-DNA 杂交,52.2%(<70%);平均核苷酸同一性,93.2%(<95%))。基于系统发育和表型结果,我们建议 AMP 菌株(DSM 21394=JCM 35360)应归类为代表新种,我们建议将其命名为 sp. nov.。