Key Laboratory of Agricultural Environmental Microbiology, Ministry of Agriculture, College of Life Sciences, Nanjing Agricultural University, Nanjing, Jiangsu 210095, PR China.
Nanjing Customs, Nanjing, Jiangsu 210001, PR China.
Int J Syst Evol Microbiol. 2020 Apr;70(4):2261-2268. doi: 10.1099/ijsem.0.004017. Epub 2020 Feb 7.
A Gram-stain-negative, aerobic, non-flagellated and filamentous-shaped bacterium, HX-16-21, was isolated from activated sludge. Strain HX-16-21 was able to degrade gentisate, protocatechuic acid and -hydroxybenzoic acid and herbicides quizalofop-p-ethyl and diclofop-methyl. The strain shared 97.2 % 16S rRNA gene sequence similarity to CCTCC AB 2015052 and less than 97 % similarities to other type strains. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain HX-16-21 belonged to the genus and formed a subclade with CCTCC AB 2015052. The major polar lipids were phosphatidylethanolamine, phosphatidylcholine and six unidentified lipids. The major fatty acids were iso-C, iso-C G and iso-C 3-OH. The predominant respiratory quinone was menaquinone 7 (MK-7). The draft genome of strain HX-16-21 was 8.1 Mb, and the G+C content was 43.5 mol%. The average nucleotide identity and digital DNA-DNA hybridization values between strain HX-16-21 and CCTCC AB 2015052 were 80.6 and 26.8 %, respectively. Based on both phenotypic and phylogenetic evidence, strain HX-16-21 is considered to represent a novel species in the genus , for which the name sp. nov. is proposed. The type strain is HX-16-21 (=KCTC 72288=ACCC 61580).
一株革兰氏阴性、需氧、不具鞭毛的丝状细菌,HX-16-21,从活性污泥中分离得到。菌株 HX-16-21 能够降解龙胆酸、原儿茶酸和 -羟基苯甲酸以及除草剂精喹禾灵和氟草醚。该菌株与 CCTCC AB 2015052 的 16S rRNA 基因序列相似度为 97.2%,与其他模式菌株的相似度低于 97%。基于 16S rRNA 基因序列的系统发育分析表明,菌株 HX-16-21 属于 属,与 CCTCC AB 2015052 形成一个亚分支。主要极性脂为磷脂酰乙醇胺、磷脂酰胆碱和六种未鉴定的脂类。主要脂肪酸为 iso-C、iso-C G 和 iso-C 3-OH。主要呼吸醌为menaquinone 7 (MK-7)。菌株 HX-16-21 的基因组草图为 8.1 Mb,G+C 含量为 43.5 mol%。菌株 HX-16-21 与 CCTCC AB 2015052 之间的平均核苷酸同一性和数字 DNA-DNA 杂交值分别为 80.6%和 26.8%。基于表型和系统发育证据,菌株 HX-16-21 被认为代表 属中的一个新种,建议命名为 sp. nov.。模式菌株为 HX-16-21(=KCTC 72288=ACCC 61580)。