Pecori Riccardo, Ren Weicheng, Pirmoradian Mohammad, Wang Xianhuo, Liu Dongbing, Berglund Mattias, Li Wei, Tasakis Rafail Nikolaos, Di Giorgio Salvatore, Ye Xiaofei, Li Xiaobo, Arnold Annette, Wüst Sandra, Schneider Martin, Selvasaravanan Karthika-Devi, Fuell Yvonne, Stafforst Thorsten, Amini Rose-Marie, Sonnevi Kristina, Enblad Gunilla, Sander Birgitta, Wahlin Björn Engelbrekt, Wu Kui, Zhang Huilai, Helm Dominic, Binder Marco, Papavasiliou F Nina, Pan-Hammarström Qiang
Division of Immune Diversity (D150), German Cancer Research Center (DKFZ), Heidelberg, Germany.
Helmholtz Institute for Translational Oncology (HI-TRON), Mainz, Germany.
iScience. 2023 May 12;26(6):106864. doi: 10.1016/j.isci.2023.106864. eCollection 2023 Jun 16.
Diffuse large B cell lymphoma (DLBCL) is one of the most common types of aggressive lymphoid malignancies. Here, we explore the contribution of RNA editing to DLBCL pathogenesis. We observed that DNA mutations and RNA editing events are often mutually exclusive, suggesting that tumors can modulate pathway outcomes by altering sequences at either the genomic or the transcriptomic level. RNA editing targets transcripts within known disease-driving pathways such as apoptosis, p53 and NF-κB signaling, as well as the RIG-I-like pathway. In this context, we show that ADAR1-mediated editing within transcript positively correlates with MAVS protein expression levels, associating with increased interferon/NF-κB signaling and T cell exhaustion. Finally, using targeted RNA base editing tools to restore editing within 3'UTR in ADAR1-deficient cells, we demonstrate that editing is likely to be causal to an increase in downstream signaling in the absence of activation by canonical nucleic acid receptor sensing.
弥漫性大B细胞淋巴瘤(DLBCL)是侵袭性淋巴恶性肿瘤最常见的类型之一。在此,我们探讨RNA编辑对DLBCL发病机制的作用。我们观察到DNA突变和RNA编辑事件通常相互排斥,这表明肿瘤可通过在基因组或转录组水平改变序列来调节信号通路结果。RNA编辑靶向已知疾病驱动通路中的转录本,如凋亡、p53和NF-κB信号通路,以及RIG-I样通路。在此背景下,我们表明ADAR1介导的转录本内编辑与MAVS蛋白表达水平呈正相关,与干扰素/NF-κB信号增强和T细胞耗竭相关。最后,使用靶向RNA碱基编辑工具恢复ADAR1缺陷细胞3'UTR内的编辑,我们证明在缺乏经典核酸受体感应激活的情况下,编辑可能是下游信号增加的原因。