Mo Solveig Sølverød, Fiskebeck Eve Zeyl, Slettemeås Jannice Schau, Lagesen Karin, Nilsson Oskar, Naseer Umaer, Jørgensen Silje Bakken, Thorsteinsdottir Thorunn Rafnar, Sunde Marianne
Section for Food Safety and Animal Health Research, Department of Animal Health, Welfare and Food Safety, Norwegian Veterinary Institute, Ås, Norway.
Section for Epidemiology, Department of Animal Health, Welfare and Food Safety, Norwegian Veterinary Institute, Ås, Norway.
Front Microbiol. 2023 May 2;14:1173287. doi: 10.3389/fmicb.2023.1173287. eCollection 2023.
belonging to multilocus sequence type 38 (ST38) is a well-known cause of extra-intestinal infections in humans, and are frequently associated with resistance to extended-spectrum cephalosporins (ESCs). Resistance to carbapenems, mediated by -genes has also been reported in this ST. Recently, the European Centre for Disease Prevention and Control (ECDC) released a rapid risk assessment on the increased detection of OXA-244 producing ST38 in humans, requesting further knowledge to determine the source. ST38 is also one of the most common STs among ESC-resistant from broiler production. Our aim was to investigate the genetic characteristics and relationship between ST38 from broiler production and humans, and to investigate if there has been a potential spillover between these sources. A total of 288 ST38 genomes isolated from humans in Europe (collected 2009-2019) and from Nordic broiler production (collected 2011-2014) were analyzed. The results showed distinct monophyletic clades associated to humans and broiler production. Furthermore, there were differences in the ESC resistance genes present in ST38 from the two sources. The gene was not present in from broiler production. Our results show that ST38 from humans and broiler production belong to well-separated clades, and suggest that the increased detection of OXA-244-producing ST38 in humans is not associated with spillover from broiler production.
属于多位点序列类型38(ST38)是人类肠道外感染的一个众所周知的原因,并且经常与对超广谱头孢菌素(ESCs)的耐药性相关。在这个ST中也报道了由-基因介导的对碳青霉烯类的耐药性。最近,欧洲疾病预防控制中心(ECDC)发布了一项关于在人类中检测到产生OXA-244的ST38增加的快速风险评估,要求获取更多知识以确定来源。ST38也是来自肉鸡生产的耐ESCs中最常见的ST之一。我们的目的是研究来自肉鸡生产和人类的ST38的遗传特征及关系,并调查这些来源之间是否存在潜在的溢出。对从欧洲人类(2009 - 2019年收集)和北欧肉鸡生产(2011 - 2014年收集)中分离出的总共288个ST38基因组进行了分析。结果显示与人类和肉鸡生产相关的明显单系分支。此外,来自两个来源的ST38中存在的ESCs耐药基因存在差异。来自肉鸡生产的中不存在该基因。我们的结果表明,来自人类和肉鸡生产的ST38属于分离良好的分支,并表明在人类中检测到的产生OXA-244的ST38增加与肉鸡生产的溢出无关。