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从因聚集体而恶化的散射轮廓中推导目标生物大分子的小角散射轮廓。沉降平衡分析-小角散射。

Derivation of the small-angle scattering profile of a target biomacromolecule from a profile deteriorated by aggregates. AUC-SAS.

作者信息

Morishima Ken, Inoue Rintaro, Sugiyama Masaaki

机构信息

Institute for Integrated Radiation and Nuclear Science, Kyoto University, 2-1010 Asashironishi, Kumatori, Sennan-gun, Osaka 590-0494, Japan.

出版信息

J Appl Crystallogr. 2023 Apr 25;56(Pt 3):624-632. doi: 10.1107/S1600576723002406. eCollection 2023 Jun 1.

DOI:10.1107/S1600576723002406
PMID:37284265
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10241049/
Abstract

Aggregates cause a fatal problem in the structural analysis of a biomacro-mol-ecule in solution using small-angle X-ray or neutron scattering (SAS): they deteriorate the scattering profile of the target molecule and lead to an incorrect structure. Recently, an integrated method of analytical ultracentrifugation (AUC) and SAS, abbreviated AUC-SAS, was developed as a new approach to overcome this problem. However, the original version of AUC-SAS does not offer a correct scattering profile of the target molecule when the weight fraction of aggregates is higher than 10%. In this study, the obstacle point in the original AUC-SAS approach is identified. The improved AUC-SAS method is then applicable to a solution with a relatively larger weight fraction of aggregates (≤20%).

摘要

聚集体在使用小角X射线或中子散射(SAS)对溶液中的生物大分子进行结构分析时会引发一个致命问题:它们会破坏目标分子的散射图谱并导致结构错误。最近,一种将分析超速离心法(AUC)和SAS相结合的方法(简称为AUC-SAS)被开发出来,作为克服这一问题的新途径。然而,当聚集体的重量分数高于10%时,原始版本的AUC-SAS无法提供目标分子的正确散射图谱。在本研究中,确定了原始AUC-SAS方法中的障碍点。改进后的AUC-SAS方法随后可应用于聚集体重量分数相对较大(≤20%)的溶液。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebdc/10241049/e008a4774628/j-56-00624-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebdc/10241049/e4d3e7255438/j-56-00624-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebdc/10241049/e44a8439a2f0/j-56-00624-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebdc/10241049/f95dc0b168da/j-56-00624-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebdc/10241049/e008a4774628/j-56-00624-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebdc/10241049/e4d3e7255438/j-56-00624-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebdc/10241049/e44a8439a2f0/j-56-00624-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebdc/10241049/f95dc0b168da/j-56-00624-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ebdc/10241049/e008a4774628/j-56-00624-fig4.jpg

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