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分离出同时产生三种碳青霉烯酶(、或、和)以及一种毒力质粒的耐碳青霉烯肺炎克雷伯菌:来自一家中国三级医院的研究。

Isolation of Hv-CRKP with co-production of three carbapenemases (, or , and ) and a virulence plasmid: a study from a Chinese tertiary hospital.

作者信息

Li Ping, Luo Wan-Ying, Xiang Tian-Xin, Peng Ting-Xiu, Luo Shuai, He Zhi-Yong, Liao Wenjian, Wei Dan-Dan, Liu Peng, Wan La-Gen, Zhang Wei, Liu Yang

机构信息

Department of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Nanchang University, Nanchang University, Nanchang, China.

Jiangxi Institute of Respiratory Disease, The First Affiliated Hospital of Nanchang University, Nanchang, China.

出版信息

Front Microbiol. 2023 May 24;14:1182870. doi: 10.3389/fmicb.2023.1182870. eCollection 2023.

Abstract

BACKGROUND

The worldwide dissemination of isolates is a significant public health concern, as these organisms possess a unique capacity to acquire genetic elements encoding both resistance and hypervirulence. This study aims to investigate the epidemiological, resistance, and virulence characteristics of isolates that carry both virulence plasmids and genes in a tertiary hospital in China.

METHODS

A total of 217 clinical isolates of carbapenem-resistant (CRKP) were collected between April 2020 and March 2022. The antimicrobial susceptibility test was conducted to evaluate the drug resistance profile. All isolates were screened for the presence of genes encoding carbapenemases (, , , , and ), ESBLs genes (, , ), and virulence plasmid pLVPK-borne genes (, , , , and ) using polymerase chain reaction (PCR) amplification. Clonal lineages were assigned using multilocus sequence typing (MLST) and pulsed-field gel electrophoresis (PFGE). The plasmid incompatibility groups were identified using PCR-based replicon typing (PBRT). The transferability of carbapenemase-encoding plasmids and pLVPK-like virulence plasmids was assessed via conjugation. The plasmid location of was determined using S1-Pulsed Field Gel Electrophoresis (S1-PFGE) and southern blotting hybridization. The virulence potential of the isolates was assessed using the string test, capsular serotyping, serum killing assay and a Galleria mellonella larval infection model.

RESULTS

Of the 217 CRKP clinical isolates collected, 23% were identified as carrying genes. All isolates exhibited resistance to commonly used clinical antimicrobial agents, except for ceftazidime/avibactam, colistin, tigecycline, trimethoprim-sulfamethOXAzole, polymyxin B, and nitrofurantoin. The main common OXA-48-like carbapenemase enzymes were found to be and . MLST and PFGE fingerprinting analysis revealed clonal transmission and plasmid transmission. OXA-48-like producing CRKP isolates mainly clustered in K64 ST11 and K47 ST15. Results of the string Test, serum killing assay () and infection model () indicated hypervirulence. PBRT showed that the and producing hypervirulent carbapenem-resistant (Hv-CRKP) were mainly carried on ColE-type, IncF, and IncX3. Eight clinical isolates of hv-CRKP were identified as carrying three carbapenem-resistant genes (, , and ). Moreover, Southern blotting hybridization revealed that all eight isolates had a pLVPK-like virulent plasmid (138.9-216.9 kb) with an uneven number and size of plasmid.

CONCLUSION

In our investigation, we have observed the emergence of hv-CRKP carrying genes, which identified two genetic relationships: clonal transmission and plasmid transmission. PBRT analysis showed that these genes were mainly carried on ColE-type, IncF, and IncX3 plasmids. These isolates have been shown to be hypervirulent and . Additionally, eight clinical isolates of hv-CRKP were identified as carrying three carbapenem-resistant genes (, , and ) and carrying a pLVPK-like virulent plasmid. Hence, our findings highlight the need for further investigation and active surveillance of hypervirulent OXA-48-like producing Hv-CRKP isolates to control their transmission.

摘要

背景

肺炎克雷伯菌分离株在全球范围内的传播是一个重大的公共卫生问题,因为这些微生物具有获取编码耐药性和高毒力的遗传元件的独特能力。本研究旨在调查中国一家三级医院中携带毒力质粒和blaOXA-48-like基因的肺炎克雷伯菌分离株的流行病学、耐药性和毒力特征。

方法

2020年4月至2022年3月期间共收集了217株耐碳青霉烯类肺炎克雷伯菌(CRKP)临床分离株。进行抗菌药物敏感性试验以评估耐药谱。使用聚合酶链反应(PCR)扩增对所有分离株进行编码碳青霉烯酶(blaKPC、blaNDM、blaVIM、blaIMP和blaOXA-48)、超广谱β-内酰胺酶基因(blaCTX-M、blaTEM、blaSHV)和毒力质粒pLVPK携带基因(mrkA、mrkB、mrkC、mrkD和fimH)的检测。使用多位点序列分型(MLST)和脉冲场凝胶电泳(PFGE)确定克隆谱系。使用基于PCR的复制子分型(PBRT)鉴定质粒不相容群。通过接合试验评估编码碳青霉烯酶的质粒和pLVPK样毒力质粒是否可转移。使用S1-脉冲场凝胶电泳(S1-PFGE)和Southern印迹杂交确定blaOXA-48的质粒定位。使用悬滴试验、荚膜血清分型、血清杀菌试验和大蜡螟幼虫感染模型评估分离株的毒力潜力。

结果

在收集的217株CRKP临床分离株中,23%被鉴定为携带blaOXA-48-like基因。所有携带blaOXA-48-like基因的分离株对常用临床抗菌药物均耐药,除了头孢他啶/阿维巴坦、黏菌素、替加环素、复方磺胺甲恶唑、多黏菌素B和呋喃妥因。主要常见的OXA-48样碳青霉烯酶为blaOXA-181和blaOXA-232。MLST和PFGE指纹图谱分析显示克隆传播和质粒传播。产OXA-48样blaOXA-48的CRKP分离株主要聚集在K64 ST11和K47 ST15。悬滴试验、血清杀菌试验(≥4)和大蜡螟感染模型(≥105 CFU/mL)结果表明具有高毒力。PBRT显示,产超毒力耐碳青霉烯类肺炎克雷伯菌(Hv-CRKP)的blaOXA-48-like和blaNDM-1主要携带在ColE型、IncF和IncX质粒上。8株hv-CRKP临床分离株被鉴定为携带3个耐碳青霉烯基因(blaOXA-48-like、blaNDM-1和blaIMP)。此外,Southern印迹杂交显示所有8株分离株均具有pLVPK样毒力质粒(138.9 - 216.9 kb),质粒数量和大小不均一。

结论

在我们的调查中,观察到携带blaOXA-48-like基因的hv-CRKP的出现,确定了两种遗传关系:克隆传播和质粒传播。PBRT分析表明这些基因主要携带在ColE型、IncF和IncX3质粒上。这些分离株已被证明具有高毒力。此外,8株hv-CRKP临床分离株被鉴定为携带3个耐碳青霉烯基因(blaOXA-48-like、blaNDM-1和blaIMP)并携带pLVPK样毒力质粒。因此,我们的研究结果强调需要对产超毒力OXA-48样的Hv-CRKP分离株进行进一步调查和主动监测,以控制其传播。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9996/10244740/975fc6ec49cd/fmicb-14-1182870-g001.jpg

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