Department of Biotechnology, Kalasalingam Academy of Research and Education, Krishnankoil 626126, India.
Department of Pharmaceutical Chemistry, Faculty of Pharmacy, M.S. Ramaiah University of Applied Sciences, Bengaluru 560054, India.
Molecules. 2023 Jun 3;28(11):4541. doi: 10.3390/molecules28114541.
The present study investigated the antioxidant potential of aqueous methanolic extracts of (L.) R.Br., followed by a pharmacoinformatics-based screening of novel Keap1 protein inhibitors. Initially, the antioxidant potential of this plant extract was assessed via antioxidant assays (DPPH, ABTS radical scavenging, and FRAP). Furthermore, 69 phytocompounds in total were derived from this plant using the IMPPAT database, and their three-dimensional structures were obtained from the PubChem database. The chosen 69 phytocompounds were docked against the Kelch-Neh2 complex protein (PDB entry ID: 2flu, resolution 1.50 Å) along with the standard drug (CPUY192018). (L.) R.Br. extract (100 µg × mL) showed 85 ± 2.917%, 78.783 ± 0.24% of DPPH, ABTS radicals scavenging activity, and 161 ± 4 μg × mol (Fe (II)) g ferric ion reducing power. The three top-scored hits, namely Hemidescine (-11.30 Kcal × mol), Beta-Amyrin (-10.00 Kcal × mol), and Quercetin (-9.80 Kcal × mol), were selected based on their binding affinities. MD simulation studies showed that all the protein-ligand complexes (Keap1-HEM, Keap1-BET, and Keap1-QUE) were highly stable during the entire simulation period, compared with the standard CPUY192018-Keap1 complex. Based on these findings, the three top-scored phytocompounds may be used as significant and safe Keap1 inhibitors, and could potentially be used for the treatment of oxidative-stress-induced health complications.
本研究调查了 (L.) R.Br. 的水甲醇提取物的抗氧化潜力,随后进行了基于 pharmacoinformatics 的新型 Keap1 蛋白抑制剂筛选。首先,通过抗氧化测定(DPPH、ABTS 自由基清除和 FRAP)评估该植物提取物的抗氧化潜力。此外,使用 IMPPAT 数据库从该植物中总共提取了 69 种植物化合物,并从 PubChem 数据库中获得了它们的三维结构。选择的 69 种植物化合物与 Kelch-Neh2 复合蛋白(PDB 条目 ID:2flu,分辨率 1.50 Å)一起以及标准药物(CPUY192018)对接。(L.)R.Br. 提取物(100µg×mL)表现出 85±2.917%、78.783±0.24%DPPH、ABTS 自由基清除活性和 161±4µg×mol(Fe(II))g 铁离子还原能力。根据结合亲和力,选择了三个得分最高的命中物,即半边莲碱(-11.30 Kcal×mol)、β-香树脂醇(-10.00 Kcal×mol)和槲皮素(-9.80 Kcal×mol)。MD 模拟研究表明,与标准的 CPUY192018-Keap1 复合物相比,所有蛋白质配体复合物(Keap1-HEM、Keap1-BET 和 Keap1-QUE)在整个模拟期间都非常稳定。基于这些发现,这三种得分最高的植物化合物可能作为重要且安全的 Keap1 抑制剂,并且可能可用于治疗氧化应激引起的健康并发症。