Division of Materials Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, Nara, Japan.
Department of Biomolecular Innovation, Institute for Biomedical Sciences, Shinshu University, Ueda, Nagano, Japan.
Methods Mol Biol. 2023;2671:79-94. doi: 10.1007/978-1-0716-3222-2_4.
Protein cages and nanostructures are promising biocompatible medical materials, such as vaccines and drug carriers. Recent advances in designed protein nanocages and nanostructures have opened up cutting-edge applications in the fields of synthetic biology and biopharmaceuticals. A simple approach for constructing self-assembling protein nanocages and nanostructures is the design of a fusion protein composed of two different proteins forming symmetric oligomers. In this chapter, we describe the design and methods of protein nanobuilding blocks (PN-Blocks) using a dimeric de novo protein WA20 to construct self-assembling protein cages and nanostructures. A protein nanobuilding block (PN-Block), WA20-foldon, was developed by fusing an intermolecularly folded dimeric de novo protein WA20 and a trimeric foldon domain from bacteriophage T4 fibritin. The WA20-foldon self-assembled into several oligomeric nanoarchitectures in multiples of 6-mer. De novo extender protein nanobuilding blocks (ePN-Blocks) were also developed by fusing tandemly two WA20 with various linkers, to construct self-assembling cyclized and extended chain-like nanostructures. These PN-Blocks would be useful for the construction of self-assembling protein cages and nanostructures and their potential applications in the future.
蛋白质笼和纳米结构是有前途的生物相容性医学材料,例如疫苗和药物载体。设计的蛋白质纳米笼和纳米结构的最新进展为合成生物学和生物制药领域开辟了前沿应用。构建自组装蛋白质纳米笼和纳米结构的一种简单方法是设计由两种形成对称寡聚物的不同蛋白质组成的融合蛋白。在本章中,我们描述了使用二聚体从头蛋白 WA20 来构建自组装蛋白质笼和纳米结构的蛋白质纳米构建块 (PN-Blocks) 的设计和方法。蛋白质纳米构建块 (PN-Block) WA20-foldon 通过融合分子间折叠的二聚体从头蛋白 WA20 和来自噬菌体 T4 纤维蛋白的三聚体 foldon 结构域而开发。WA20-foldon 自组装成多个 6 聚体倍数的寡聚纳米结构。还通过串联融合两个具有各种接头的 WA20 来开发从头延伸蛋白纳米构建块 (ePN-Blocks),以构建自组装的环状和延伸链状纳米结构。这些 PN-Blocks 将有助于构建自组装蛋白质笼和纳米结构及其在未来的潜在应用。