Fryer Emily, Guha Sujay, Rogel-Hernandez Lucero E, Logan-Garbisch Theresa, Farah Hodan, Rezaei Ehsan, Mollhoff Iris N, Nekimken Adam L, Xu Angela, Selin Seyahi Lara, Fechner Sylvia, Druckmann Shaul, Clandinin Thomas R, Rhee Seung Y, Goodman Miriam B
Department of Plant Biology, Carnegie Institution for Science.
Department of Molecular and Cellular Physiology, Stanford University.
bioRxiv. 2024 Apr 3:2023.06.02.542933. doi: 10.1101/2023.06.02.542933.
Throughout history, humans have relied on plants as a source of medication, flavoring, and food. Plants synthesize large chemical libraries and release many of these compounds into the rhizosphere and atmosphere where they affect animal and microbe behavior. To survive, nematodes must have evolved the sensory capacity to distinguish plant-made small molecules (SMs) that are harmful and must be avoided from those that are beneficial and should be sought. This ability to classify chemical cues as a function of their value is fundamental to olfaction, and represents a capacity shared by many animals, including humans. Here, we present an efficient platform based on multi-well plates, liquid handling instrumentation, inexpensive optical scanners, and bespoke software that can efficiently determine the valence (attraction or repulsion) of single SMs in the model nematode, . Using this integrated hardware-wetware-software platform, we screened 90 plant SMs and identified 37 that attracted or repelled wild-type animals, but had no effect on mutants defective in chemosensory transduction. Genetic dissection indicates that for at least 10 of these SMs, response valence emerges from the integration of opposing signals, arguing that olfactory valence is often determined by integrating chemosensory signals over multiple lines of information. This study establishes that is an effective discovery engine for determining chemotaxis valence and for identifying natural products detected by the chemosensory nervous system.
纵观历史,人类一直依赖植物作为药物、调味料和食物的来源。植物合成大量化学文库,并将许多此类化合物释放到根际和大气中,在那里它们会影响动物和微生物的行为。为了生存,线虫必须进化出感官能力,以区分植物产生的有害小分子(SMs)和有益且应寻找的小分子。将化学线索根据其价值进行分类的这种能力是嗅觉的基础,并且是包括人类在内的许多动物共有的能力。在这里,我们展示了一个基于多孔板、液体处理仪器、廉价光学扫描仪和定制软件的高效平台,该平台可以有效地确定模式线虫中单个SMs的效价(吸引或排斥)。使用这个集成的硬件-湿件-软件平台,我们筛选了90种植物SMs,鉴定出37种对野生型动物有吸引或排斥作用,但对化学感觉转导缺陷的突变体没有影响的物质。基因剖析表明,对于这些SMs中的至少10种,反应效价来自相反信号的整合,这表明嗅觉效价通常是通过整合多条信息线上的化学感觉信号来确定的。这项研究表明,对于确定趋化效价和识别化学感觉神经系统检测到的天然产物而言,是一个有效的发现引擎。