• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

单链纳米颗粒中的序列模式、形态和分散性:来自模拟和机器学习的见解

Sequence Patterning, Morphology, and Dispersity in Single-Chain Nanoparticles: Insights from Simulation and Machine Learning.

作者信息

Patel Roshan A, Colmenares Sophia, Webb Michael A

机构信息

Department of Chemical and Biological Engineering, Princeton University, Princeton, New Jersey 08544, USA.

出版信息

ACS Polym Au. 2023 Jun 5;3(3):284-294. doi: 10.1021/acspolymersau.3c00007. eCollection 2023 Jun 14.

DOI:10.1021/acspolymersau.3c00007
PMID:37334192
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10273411/
Abstract

Single-chain nanoparticles (SCNPs) are intriguing materials inspired by proteins that consist of a single precursor polymer chain that has collapsed into a stable structure. In many prospective applications, such as catalysis, the utility of a single-chain nanoparticle will intricately depend on the formation of a mostly specific structure or morphology. However, it is not generally well understood how to reliably control the morphology of single-chain nanoparticles. To address this knowledge gap, we simulate the formation of 7680 distinct single-chain nanoparticles from precursor chains that span a wide range of, in principle, tunable patterning characteristics of cross-linking moieties. Using a combination of molecular simulation and machine learning analyses, we show how the overall fraction of functionalization and blockiness of cross-linking moieties biases the formation of certain local and global morphological characteristics. Importantly, we illustrate and quantify the dispersity of morphologies that arise due to the stochastic nature of collapse from a well-defined sequence as well as from the ensemble of sequences that correspond to a given specification of precursor parameters. Moreover, we also examine the efficacy of precise sequence control in achieving morphological outcomes in different regimes of precursor parameters. Overall, this work critically assesses how precursor chains might be feasibly tailored to achieve given SCNP morphologies and provides a platform to pursue future sequence-based design.

摘要

单链纳米颗粒(SCNPs)是受蛋白质启发的有趣材料,由一条已折叠成稳定结构的单一前体聚合物链组成。在许多潜在应用中,如催化,单链纳米颗粒的效用将复杂地取决于形成大多特定的结构或形态。然而,如何可靠地控制单链纳米颗粒的形态,目前人们普遍还不太清楚。为了填补这一知识空白,我们模拟了由前体链形成的7680种不同的单链纳米颗粒,这些前体链涵盖了原则上可调节的交联部分的广泛图案化特征。通过结合分子模拟和机器学习分析,我们展示了功能化的总体比例和交联部分的嵌段性如何影响某些局部和全局形态特征的形成。重要的是,我们说明了并量化了由于从明确序列以及与给定前体参数规格相对应的序列集合中塌缩的随机性而产生的形态分散性。此外,我们还研究了精确序列控制在不同前体参数范围内实现形态结果的有效性。总体而言,这项工作批判性地评估了如何合理定制前体链以实现给定的SCNP形态,并提供了一个追求未来基于序列设计的平台。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cff/10273411/a6db2456a1db/lg3c00007_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cff/10273411/79c7235b143d/lg3c00007_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cff/10273411/1b46ed29a16e/lg3c00007_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cff/10273411/ce606cfb36be/lg3c00007_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cff/10273411/4649fdaee22c/lg3c00007_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cff/10273411/ae24b45aff76/lg3c00007_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cff/10273411/a6db2456a1db/lg3c00007_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cff/10273411/79c7235b143d/lg3c00007_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cff/10273411/1b46ed29a16e/lg3c00007_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cff/10273411/ce606cfb36be/lg3c00007_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cff/10273411/4649fdaee22c/lg3c00007_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cff/10273411/ae24b45aff76/lg3c00007_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4cff/10273411/a6db2456a1db/lg3c00007_0006.jpg

相似文献

1
Sequence Patterning, Morphology, and Dispersity in Single-Chain Nanoparticles: Insights from Simulation and Machine Learning.单链纳米颗粒中的序列模式、形态和分散性:来自模拟和机器学习的见解
ACS Polym Au. 2023 Jun 5;3(3):284-294. doi: 10.1021/acspolymersau.3c00007. eCollection 2023 Jun 14.
2
Local Domain Size in Single-Chain Polymer Nanoparticles.单链聚合物纳米颗粒中的局部域尺寸
ACS Omega. 2018 Aug 2;3(8):8648-8654. doi: 10.1021/acsomega.8b01331. eCollection 2018 Aug 31.
3
Förster resonance energy transfer within single chain nanoparticles.单链纳米颗粒内的荧光共振能量转移
Chem Sci. 2024 Feb 28;15(14):5218-5224. doi: 10.1039/d3sc06651g. eCollection 2024 Apr 3.
4
Glass-Transition Dynamics of Mixtures of Linear Poly(vinyl methyl ether) with Single-Chain Polymer Nanoparticles: Evidence of a New Type of Nanocomposite Materials.线性聚(乙烯基甲基醚)与单链聚合物纳米颗粒混合物的玻璃化转变动力学:新型纳米复合材料的证据
Polymers (Basel). 2019 Mar 21;11(3):533. doi: 10.3390/polym11030533.
5
Single-chain polymer nanoparticles in controlled drug delivery and targeted imaging.载药单链聚合物纳米粒的控释和靶向成像。
J Control Release. 2018 Sep 28;286:326-347. doi: 10.1016/j.jconrel.2018.07.041. Epub 2018 Aug 9.
6
Effects of Drug Conjugation on the Biological Activity of Single-Chain Nanoparticles.药物偶联对单链纳米颗粒生物活性的影响。
Biomacromolecules. 2024 Feb 12;25(2):675-689. doi: 10.1021/acs.biomac.3c00862. Epub 2024 Jan 24.
7
Why Single-Chain Nanoparticles from Weak Polyelectrolytes Can Be Synthesized at Large Scale in Concentrated Solution?为什么弱聚电解质的单链纳米颗粒可以在浓溶液中大规模合成?
Macromol Rapid Commun. 2024 Nov;45(21):e2400453. doi: 10.1002/marc.202400453. Epub 2024 Jul 16.
8
How Far Are Single-Chain Polymer Nanoparticles in Solution from the Globular State?溶液中的单链聚合物纳米颗粒与球状状态相差多远?
ACS Macro Lett. 2014 Aug 19;3(8):767-772. doi: 10.1021/mz500354q. Epub 2014 Jul 24.
9
Effect of chain stiffness on the structure of single-chain polymer nanoparticles.链刚度对单链聚合物纳米颗粒结构的影响。
J Phys Condens Matter. 2018 Jan 24;30(3):034001. doi: 10.1088/1361-648X/aa9f5c.
10
Imaging Single-Chain Nanoparticle Folding via High-Resolution Mass Spectrometry.通过高分辨率质谱成像研究单链纳米颗粒的折叠。
J Am Chem Soc. 2017 Jan 11;139(1):51-54. doi: 10.1021/jacs.6b10952. Epub 2016 Dec 27.

引用本文的文献

1
Function without form in synthetic polymers mimicking protein hydration.在模拟蛋白质水合作用的合成聚合物中无定形的功能。
Nat Chem. 2025 Jul;17(7):979-981. doi: 10.1038/s41557-025-01858-0.
2
Designing single-polymer-chain nanoparticles to mimic biomolecular hydration frustration.设计单聚合物链纳米颗粒以模拟生物分子水合受挫现象。
Nat Chem. 2025 Mar 12. doi: 10.1038/s41557-025-01760-9.
3
Machine Learning in Polymer Research.聚合物研究中的机器学习

本文引用的文献

1
A User's Guide to Machine Learning for Polymeric Biomaterials.用于高分子生物材料的机器学习用户指南
ACS Polym Au. 2022 Nov 17;3(2):141-157. doi: 10.1021/acspolymersau.2c00037. eCollection 2023 Apr 12.
2
Population-based heteropolymer design to mimic protein mixtures.基于人群的杂聚物设计来模拟蛋白质混合物。
Nature. 2023 Mar;615(7951):251-258. doi: 10.1038/s41586-022-05675-0. Epub 2023 Mar 8.
3
Data-Driven Methods for Accelerating Polymer Design.加速聚合物设计的数据驱动方法。
Adv Mater. 2025 Mar;37(11):e2413695. doi: 10.1002/adma.202413695. Epub 2025 Feb 9.
4
Mapping Composition Evolution through Synthesis, Purification, and Depolymerization of Random Heteropolymers.通过随机杂聚物的合成、纯化和解聚来绘制组成演变
J Am Chem Soc. 2024 Mar 6;146(9):6178-6188. doi: 10.1021/jacs.3c13909. Epub 2024 Feb 22.
ACS Polym Au. 2021 Dec 28;2(1):8-26. doi: 10.1021/acspolymersau.1c00035. eCollection 2022 Feb 9.
4
Data-Driven Design of Polymer-Based Biomaterials: High-throughput Simulation, Experimentation, and Machine Learning.基于数据驱动的聚合物基生物材料设计:高通量模拟、实验和机器学习。
ACS Appl Bio Mater. 2024 Feb 19;7(2):510-527. doi: 10.1021/acsabm.2c00962. Epub 2023 Jan 26.
5
Classifying soft self-assembled materials via unsupervised machine learning of defects.通过对缺陷进行无监督机器学习来对软自组装材料进行分类。
Commun Chem. 2022 Jul 14;5(1):82. doi: 10.1038/s42004-022-00699-z.
6
Sequence Design of Random Heteropolymers as Protein Mimics.随机杂聚物序列设计作为蛋白质模拟物。
Biomacromolecules. 2023 Feb 13;24(2):652-660. doi: 10.1021/acs.biomac.2c01036. Epub 2023 Jan 13.
7
Predicting Adhesive Free Energies of Polymer-Surface Interactions with Machine Learning.利用机器学习预测聚合物-表面相互作用的粘附自由能
ACS Appl Mater Interfaces. 2022 Aug 17;14(32):37161-37169. doi: 10.1021/acsami.2c08891. Epub 2022 Aug 2.
8
Predicting aggregate morphology of sequence-defined macromolecules with recurrent neural networks.使用递归神经网络预测序列定义的大分子的聚集形态。
Soft Matter. 2022 Jul 13;18(27):5037-5051. doi: 10.1039/d2sm00452f.
9
100th Anniversary of Macromolecular Science Viewpoint: Re-examining Single-Chain Nanoparticles.大分子科学视角100周年:重新审视单链纳米颗粒
ACS Macro Lett. 2020 Dec 15;9(12):1836-1843. doi: 10.1021/acsmacrolett.0c00774. Epub 2020 Dec 4.
10
Practical Prediction of Heteropolymer Composition and Drift.杂聚物组成与漂移的实际预测
ACS Macro Lett. 2019 Jan 15;8(1):36-40. doi: 10.1021/acsmacrolett.8b00813. Epub 2018 Dec 19.