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细胞周期周期性变化对细胞群体动态的影响。

Impact of variability in cell cycle periodicity on cell population dynamics.

机构信息

Bioengineering Department, The University of Texas at Dallas, Richardson, Texas, United States of America.

Center for Systems Biology, The University of Texas at Dallas, Richardson, Texas, United States of America.

出版信息

PLoS Comput Biol. 2023 Jun 20;19(6):e1011080. doi: 10.1371/journal.pcbi.1011080. eCollection 2023 Jun.

Abstract

The cell cycle consists of a series of orchestrated events controlled by molecular sensing and feedback networks that ultimately drive the duplication of total DNA and the subsequent division of a single parent cell into two daughter cells. The ability to block the cell cycle and synchronize cells within the same phase has helped understand factors that control cell cycle progression and the properties of each individual phase. Intriguingly, when cells are released from a synchronized state, they do not maintain synchronized cell division and rapidly become asynchronous. The rate and factors that control cellular desynchronization remain largely unknown. In this study, using a combination of experiments and simulations, we investigate the desynchronization properties in cervical cancer cells (HeLa) starting from the G1/S boundary following double-thymidine block. Propidium iodide (PI) DNA staining was used to perform flow cytometry cell cycle analysis at regular 8 hour intervals, and a custom auto-similarity function to assess the desynchronization and quantify the convergence to an asynchronous state. In parallel, we developed a single-cell phenomenological model the returns the DNA amount across the cell cycle stages and fitted the parameters using experimental data. Simulations of population of cells reveal that the cell cycle desynchronization rate is primarily sensitive to the variability of cell cycle duration within a population. To validate the model prediction, we introduced lipopolysaccharide (LPS) to increase cell cycle noise. Indeed, we observed an increase in cell cycle variability under LPS stimulation in HeLa cells, accompanied with an enhanced rate of cell cycle desynchronization. Our results show that the desynchronization rate of artificially synchronized in-phase cell populations can be used a proxy of the degree of variance in cell cycle periodicity, an underexplored axis in cell cycle research.

摘要

细胞周期由一系列受分子感应和反馈网络控制的有序事件组成,这些事件最终驱动总 DNA 的复制和单个亲代细胞分裂为两个子细胞。能够阻断细胞周期并使细胞在同一相中同步化,有助于理解控制细胞周期进程的因素和每个细胞周期相的特性。有趣的是,当细胞从同步状态中释放出来时,它们不会保持同步的细胞分裂,而是迅速变得不同步。细胞去同步的速度和控制因素在很大程度上仍然未知。在这项研究中,我们使用实验和模拟相结合的方法,研究了双胸苷阻断后从 G1/S 边界开始的宫颈癌(HeLa)细胞的去同步化特性。碘化丙啶(PI)DNA 染色用于定期 8 小时间隔进行流式细胞术细胞周期分析,并使用自定义自相似性函数评估去同步化并量化向异步状态的收敛。同时,我们开发了一个单细胞现象学模型,该模型返回细胞周期阶段的 DNA 量,并使用实验数据拟合参数。细胞群体的模拟表明,细胞周期去同步化速率主要对群体内细胞周期持续时间的可变性敏感。为了验证模型预测,我们引入了脂多糖(LPS)来增加细胞周期噪声。事实上,我们观察到 LPS 刺激下 HeLa 细胞的细胞周期变异性增加,伴随着细胞周期去同步化速率的提高。我们的结果表明,人工同步同相细胞群体的去同步化速率可以用作细胞周期周期性方差程度的指标,这是细胞周期研究中一个尚未探索的轴。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ba6c/10313040/394472a15d85/pcbi.1011080.g001.jpg

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