Vásquez-Ocmín Pedro G, Cojean Sandrine, Roumy Vincent, Marti Guillaume, Pomel Sébastien, Gadea Alice, Leblanc Karine, Dennemont Indira, Ruiz-Vásquez Liliana, Ricopa Cotrina Hivelli, Ruiz Mesia Wilfredo, Bertani Stéphane, Ruiz Mesia Lastenia, Maciuk Alexandre
UMR152 PHARMADEV, IRD, UPS, Université de Toulouse, Toulouse, France.
Université Paris-Saclay, CNRS, BioCIS, Orsay, France.
Front Pharmacol. 2023 Jun 5;14:1100542. doi: 10.3389/fphar.2023.1100542. eCollection 2023.
High prevalence of parasitic or bacterial infectious diseases in some world areas is due to multiple reasons, including a lack of an appropriate health policy, challenging logistics and poverty. The support to research and development of new medicines to fight infectious diseases is one of the sustainable development goals promoted by World Health Organization (WHO). In this sense, the traditional medicinal knowledge substantiated by ethnopharmacology is a valuable starting point for drug discovery. This work aims at the scientific validation of the traditional use of species ("") as firsthand anti-infectious medicines. For this purpose, we adapted a computational statistical model to correlate the LCMS chemical profiles of 54 extracts from 19 species to their corresponding anti-infectious assay results based on 37 microbial or parasites strains. We mainly identified two groups of bioactive compounds (called features as they are considered at the analytical level and are not formally isolated). Group 1 is composed of 11 features being highly correlated to an inhibiting activity on 21 bacteria (principally Gram-positive strains), one fungus (), and one parasite (). The group 2 is composed of 9 features having a clear selectivity on (all strains, both axenic and intramacrophagic). Bioactive features in group 1 were identified principally in the extracts of and . In group 2, bioactive features were distributed in the extracts of 14 species. This multiplexed approach provided a broad picture of the metabolome as well as a map of compounds putatively associated to bioactivity. To our knowledge, the implementation of this type of metabolomics tools aimed at identifying bioactive compounds has not been used so far.
世界上一些地区寄生虫或细菌感染性疾病的高流行率是由多种原因造成的,包括缺乏适当的卫生政策、物流挑战和贫困。支持研发抗传染病新药是世界卫生组织(WHO)推动的可持续发展目标之一。从这个意义上说,由民族药理学证实的传统医学知识是药物发现的宝贵起点。这项工作旨在对作为一线抗感染药物的物种(“”)的传统用途进行科学验证。为此,我们采用了一种计算统计模型,将来自19种物种的54种提取物的液相色谱-质谱(LCMS)化学图谱与其基于37种微生物或寄生虫菌株的相应抗感染试验结果相关联。我们主要鉴定出两组生物活性化合物(在分析层面被视为特征,尚未正式分离)。第一组由11个特征组成,这些特征与对21种细菌(主要是革兰氏阳性菌株)、一种真菌()和一种寄生虫()的抑制活性高度相关。第二组由9个对(所有菌株,包括无菌和巨噬细胞内菌株)具有明显选择性的特征组成。第一组中的生物活性特征主要在和的提取物中鉴定出来。在第二组中,生物活性特征分布在14种物种的提取物中。这种多重方法提供了代谢组的广泛概况以及与生物活性可能相关的化合物图谱。据我们所知,迄今为止尚未使用这种旨在鉴定生物活性化合物的代谢组学工具。