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使用血小板 RNA 鉴别前毛细血管性和后毛细血管性肺动脉高压

Discrimination Between Pre- and Postcapillary Pulmonary Hypertension Using Platelet RNA.

机构信息

Amsterdam Cardiovascular Sciences Pulmonary Hypertension and Thrombosis Amsterdam The Netherlands.

Department of Pulmonology Amsterdam UMC Location Vrije Universiteit Amsterdam Amsterdam The Netherlands.

出版信息

J Am Heart Assoc. 2023 Jul 4;12(13):e028447. doi: 10.1161/JAHA.122.028447. Epub 2023 Jun 22.

Abstract

Background Appropriate treatment of pulmonary hypertension (PH) is critically dependent on accurate discrimination between pre- and postcapillary PH. However, clinical discrimination is challenging and frequently requires a right heart catheterization. Existing risk scores to detect postcapillary PH have suboptimal discriminatory strength. We have previously shown that platelet-derived RNA profiles may have diagnostic value for PH detection. Here, we hypothesize that platelet-derived RNAs can be employed to select unique biomarker panels for the discrimination between pre- and postcapillary PH. Methods and Results Blood platelet RNA from whole blood was isolated and sequenced from 50 patients with precapillary PH (with different PH subtypes) as well as 50 patients with postcapillary PH. RNA panels were calculated by ANOVA statistics, and classifications were performed using a support vector machine algorithm, supported by particle swarm optimization. We identified in total 4279 different RNAs in blood platelets from patients with pre- and postcapillary PH. A particle swarm optimization-selected RNA panel of 1618 distinctive RNAs with differential levels together with a trained support vector machine algorithm accurately discriminated patients with precapillary PH from patients with postcapillary PH with 100% sensitivity, 60% specificity, 80% accuracy, and 0.95 (95% CI, 0.86-1.00) area under the curve in the independent validation series (n=20). Conclusions This proof-of-concept study demonstrates that particle swarm optimization/support vector machine-enhanced classification of platelet RNA panels may be able to discriminate precapillary PH from postcapillary PH. This research provides a foundation for the development of a blood test with a high negative predictive value that would improve early diagnosis of precapillary PH and prevents unnecessary invasive testing in patients with postcapillary PH.

摘要

背景

肺动脉高压(PH)的恰当治疗严重依赖于对毛细血管前和毛细血管后 PH 的准确区分。然而,临床鉴别具有挑战性,且通常需要进行右心导管检查。现有的用于检测毛细血管后 PH 的风险评分的鉴别强度不足。我们之前已经表明,血小板衍生的 RNA 谱可能对 PH 的检测具有诊断价值。在这里,我们假设血小板衍生的 RNA 可以用于选择用于区分毛细血管前和毛细血管后 PH 的独特生物标志物组。

方法和结果

从 50 例毛细血管前 PH(具有不同 PH 亚型)和 50 例毛细血管后 PH 患者的全血中分离并测序血小板 RNA。通过方差分析统计学计算 RNA 谱,并通过支持向量机算法进行分类,支持向量机算法由粒子群优化算法支持。我们总共鉴定了来自毛细血管前 PH 和毛细血管后 PH 患者的血小板中 4279 种不同的 RNA。由粒子群优化选择的 1618 个具有差异水平的独特 RNA 组成的 RNA 组与经过训练的支持向量机算法相结合,可以 100%的灵敏度、60%的特异性、80%的准确性和 0.95(95%CI,0.86-1.00)的曲线下面积在独立验证系列(n=20)中准确区分毛细血管前 PH 和毛细血管后 PH 患者。

结论

这项概念验证研究表明,粒子群优化/支持向量机增强的血小板 RNA 谱分类可能能够区分毛细血管前 PH 和毛细血管后 PH。这项研究为开发具有高阴性预测值的血液测试提供了基础,该测试可以改善毛细血管前 PH 的早期诊断,并防止在毛细血管后 PH 患者中进行不必要的有创性检查。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2ac2/10356096/ea297af5f6e9/JAH3-12-e028447-g002.jpg

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