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利用 TaqMan 探针基于绝缘恒温聚合酶链反应(iiPCR)的亚洲韧皮杆菌现场检测系统。

On-site detection system of Candidatus Liberibacter asiaticus by using TaqMan probe-based insulated isothermal polymerase chain reaction (iiPCR).

机构信息

Department of Plant Pathology and Microbiology, National Taiwan University, Taipei, Taiwan.

Division of Forest Protection, Taiwan Forestry Research Institute, Taipei, Taiwan.

出版信息

PLoS One. 2023 Jun 23;18(6):e0287699. doi: 10.1371/journal.pone.0287699. eCollection 2023.

DOI:10.1371/journal.pone.0287699
PMID:37352328
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10289410/
Abstract

Citrus Huanglongbing (HLB) is one of the most destructive diseases of citrus plants caused by the obligate and phloem-limiting bacterium Candidatus Liberibacter asiaticus (Las). Reliable detection methods are important for successful control of the disease. This study was aimed to develop a rapid and user-friendly on-site detection system for Las using the TaqMan probe-based insulated isothermal polymerase chain reaction (iiPCR) assay. The Las-specific on-site detection system could be completed within one hour by simple DNA extraction coupled with a portable POCKIT device, which can perform PCR amplification and automatically provide qualitative results derived from fluorescence signals. The sensitivity of the TaqMan probe-iiPCR assay could be as low as single copy of Las, comparable to a real-time PCR method. Further testing of the field citrus samples showed 100% agreement between the TaqMan probe-iiPCR assay and the real-time PCR method, and the on-site detection system also demonstrated a great performance of Las detection. With high specificity and sensitivity, the on-site detection system developed in this study becomes a simple, rapid and powerful tool for detecting Las in fields.

摘要

柑橘黄龙病(HLB)是由韧皮部限养的专性细菌柑橘黄龙病菌(Candidatus Liberibacter asiaticus,Las)引起的柑橘类植物最具破坏性的疾病之一。可靠的检测方法对于成功控制该疾病至关重要。本研究旨在利用 TaqMan 探针基于隔热等温聚合酶链反应(iiPCR)检测法,开发一种用于 Las 的快速、用户友好的现场检测系统。Las 特异性现场检测系统通过简单的 DNA 提取与便携式 POCKIT 设备结合,在一小时内即可完成,该设备可进行 PCR 扩增,并自动提供源自荧光信号的定性结果。TaqMan 探针-iiPCR 检测法的灵敏度可低至 Las 的单个拷贝,与实时 PCR 方法相当。对田间柑橘样本的进一步测试表明,TaqMan 探针-iiPCR 检测法与实时 PCR 方法之间的一致性达到 100%,现场检测系统还展示了 Las 检测的出色性能。该研究开发的现场检测系统具有高度特异性和灵敏度,成为田间检测 Las 的一种简单、快速和强大的工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a7f/10289410/b0b08fb14a19/pone.0287699.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a7f/10289410/9b243fa916ce/pone.0287699.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a7f/10289410/f0b067293825/pone.0287699.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a7f/10289410/b0b08fb14a19/pone.0287699.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a7f/10289410/9b243fa916ce/pone.0287699.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a7f/10289410/f0b067293825/pone.0287699.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3a7f/10289410/b0b08fb14a19/pone.0287699.g003.jpg

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