College of Pharmacy, Nanjing University of Chinese Medicine, Nanjing, 210023, China.
Collaborative Innovation Center of Chinese Medicinal Resources Industrialization, Nanjing, 210023, China.
BMC Plant Biol. 2023 Jun 30;23(1):345. doi: 10.1186/s12870-023-04345-1.
Perilla frutescens is widely used as both a medicine and a food worldwide. Its volatile oils are its active ingredients, and, based on the different volatile constituents, P. frutescens can be divided into several chemotypes, with perilla ketone (PK) being the most common. However, the key genes involved in PK biosynthesis have not yet been identified.
In this study, metabolite constituents and transcriptomic data were compared in leaves of different levels. The variation in PK levels was the opposite of that of isoegoma ketone and egoma ketone in leaves at different levels. Based on transcriptome data, eight candidate genes were identified and successfully expressed in a prokaryotic system. Sequence analysis revealed them to be double bond reductases (PfDBRs), which are members of the NADPH-dependent, medium-chain dehydrogenase/reductase (MDR) superfamily. They catalyze the conversion of isoegoma ketone and egoma ketone into PK in in vitro enzymatic assays. PfDBRs also showed activity on pulegone, 3-nonen-2-one, and 4-hydroxybenzalacetone. In addition, several genes and transcription factors were predicted to be associated with monoterpenoid biosynthesis, and their expression profiles were positively correlated with variations in PK abundance, suggesting their potential functions in PK biosynthesis.
The eight candidate genes encoding a novel double bond reductase related to perilla ketone biosynthesis were identified in P. frutescens, which carries similar sequences and molecular features as the MpPR and NtPR from Nepeta tenuifolia and Mentha piperita, respectively. These findings not only reveal the pivotal roles of PfDBR in exploring and interpreting PK biological pathway but also contribute to facilitating future studies on this DBR protein family.
紫苏在全球范围内被广泛用作药物和食品。其挥发性油是其活性成分,根据不同的挥发性成分,紫苏可以分为几种化学型,其中紫苏酮(PK)最为常见。然而,参与 PK 生物合成的关键基因尚未被鉴定。
本研究比较了不同水平叶片的代谢产物成分和转录组数据。PK 水平的变化与不同水平叶片中异缬草酮和缬草酮的变化相反。基于转录组数据,鉴定了 8 个候选基因,并在原核系统中成功表达。序列分析表明它们是双键还原酶(PfDBRs),是 NADPH 依赖性的中链脱氢酶/还原酶(MDR)超家族的成员。它们在体外酶促测定中催化异缬草酮和缬草酮转化为 PK。PfDBRs 对侧柏酮、3-壬烯-2-酮和 4-羟基苯乙酮也具有活性。此外,预测了几个与单萜生物合成相关的基因和转录因子,它们的表达谱与 PK 丰度的变化呈正相关,表明它们在 PK 生物合成中的潜在功能。
从紫苏中鉴定出了 8 个编码与紫苏酮生物合成相关的新型双键还原酶的候选基因,这些基因与 Nepeta tenuifolia 和 Mentha piperita 的 MpPR 和 NtPR 具有相似的序列和分子特征。这些发现不仅揭示了 PfDBR 在探索和解释 PK 生物途径中的关键作用,而且有助于促进对该 DBR 蛋白家族的未来研究。