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柠檬酸与不同杂环化合物的氢键超分子组装体中结构拓扑的系统探索

Systematic Exploration of Structural Topologies in Hydrogen-Bonded Supramolecular Assemblies of Citric Acid with Different Heterocyclic Compounds.

作者信息

Easmin Samina, Pedireddi Venkateswara Rao

机构信息

Solid State & Supramolecular Chemistry Laboratory, School of Basic Sciences, Indian Institute of Technology Bhubaneswar, Argul, Bhubaneswar 752 050, India.

出版信息

ACS Omega. 2023 Jun 15;8(25):23202-23217. doi: 10.1021/acsomega.3c03446. eCollection 2023 Jun 27.

Abstract

Hydrogen-bonded supramolecular assemblies of citric acid, , with some heterocyclic compounds (-donor and -oxide)-acridine (), phenazine (), 1,10-phenanthroline (), 1,7-phenanthroline (), 4,7-phenanthroline (), 1,4-diazabicyclo[2.2.2]octane (), and 4,4'-bipyridyl-,'-dioxide ()-have been reported. Among these, only the -donors and -oxide () form neutral co-crystals, while the others form salts owing to the deprotonation of -COOH. Thus, depending on the nature of the aggregate (salt/co-crystal), recognition between the co-formers is established through O-H···N/N-H···O/NH···O hydrogen bonding. Additionally, molecules establish interactions mediated by O-H···O hydrogen bonds. Moreover, forms a cyclic network with the co-formers or on its own, with a noteworthy feature of formation of host-guest networks in the assemblies with and (solvated). In the assembly of , the molecules form a host network and captivate molecules as guest species, while in the case of assembly, both the co-formers together encapsulate the solvent in the channels. However, the observed cyclic networks in the other structures form three-dimensional topologies in the form of ladders, a sandwich, lamellar layers, and interpenetrated networks. The structural features of the ensembles are evaluated unequivocally by the single-crystal X-ray diffraction method, while the homogeneity and phase purity are evaluated by using the powder X-ray diffraction method and differential scanning calorimetry. Further, conformational analysis of molecules reveals three types of conformations-T-shape (type I), (type II), and (type III) as also observed in the literature for other co-crystals. In addition, the strength of the intermolecular interactions is quantified by performing Hirshfeld analysis.

摘要

据报道,柠檬酸与一些杂环化合物(-供体和-氧化物)——吖啶()、吩嗪()、1,10-菲咯啉()、1,7-菲咯啉()、4,7-菲咯啉()、1,4-二氮杂双环[2.2.2]辛烷()和4,4'-联吡啶-,'-二氧化物()形成了氢键超分子聚集体。其中,只有-供体和-氧化物()形成中性共晶体,而其他的由于-COOH去质子化而形成盐。因此,根据聚集体(盐/共晶体)的性质,共形成物之间通过O-H···N/N-H···O/NH···O氢键建立识别。此外,分子通过O-H···O氢键介导建立相互作用。而且,与共形成物或自身形成环状网络,在与和(溶剂化)的聚集体中形成主客体网络是一个值得注意的特征。在的聚集体中,分子形成主体网络并捕获分子作为客体物种,而在组装的情况下,两种共形成物一起将溶剂封装在通道中。然而,在其他结构中观察到的环状网络以梯子、三明治、层状层和互穿网络的形式形成三维拓扑结构。通过单晶X射线衍射方法明确评估聚集体的结构特征,而使用粉末X射线衍射方法和差示扫描量热法评估均匀性和相纯度。此外,分子的构象分析揭示了三种构象——T形(I型)、(II型)和(III型),这在其他共晶体的文献中也有观察到。此外,通过进行 Hirshfeld 分析来量化分子间相互作用的强度。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/376e/10308566/308fefe297ef/ao3c03446_0013.jpg

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