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[用于提高热稳定性的ω-转氨酶的半理性进化]

[Semi-rational evolution of ω-transaminase from for enhancing the thermostability].

作者信息

Cai Tingting, Cao Jiaren, Qiu Shuai, Lyu Changjiang, Fan Fangfang, Hu Sheng, Zhao Weirui, Mei Lehe, Huang Jun

机构信息

School of Biological and Chemical Engineering, Zhejiang University of Science and Technology, Hangzhou 310023, Zhejiang, China.

School of Biological and Chemical Engineering, Ningbo Tech University, Ningbo 315100, Zhejiang, China.

出版信息

Sheng Wu Gong Cheng Xue Bao. 2023 Jun 25;39(6):2126-2140. doi: 10.13345/j.cjb.220927.

DOI:10.13345/j.cjb.220927
PMID:37401586
Abstract

ω-transaminase (ω-TA) is a natural biocatalyst that has good application potential in the synthesis of chiral amines. However, the poor stability and low activity of ω-TA in the process of catalyzing unnatural substrates greatly hampers its application. To overcome these shortcomings, the thermostability of ()-ω-TA (TA) from was engineered by combining molecular dynamics simulation assisted computer-aided design with random and combinatorial mutation. An optimal mutant TA-E104D/A246V/R266Q (M3) with synchronously enhanced thermostability and activity was obtained. Compared with the wild- type (WT) enzyme, the half-life (35 ℃) of M3 was prolonged by 4.8-time (from 17.8 min to 102.7 min), and the half deactivation temperature () was increased from 38.1 ℃ to 40.3 ℃. The catalytic efficiencies toward pyruvate and 1-()-phenylethylamine of M3 were 1.59- and 1.56-fold that of WT. Molecular dynamics simulation and molecular docking showed that the reinforced stability of α-helix caused by the increase of hydrogen bond and hydrophobic interaction in molecules was the main reason for the improvement of enzyme thermostability. The enhanced hydrogen bond of substrate with surrounding amino acid residues and the enlarged substrate binding pocket contributed to the increased catalytic efficiency of M3. Substrate spectrum analysis revealed that the catalytic performance of M3 on 11 aromatic ketones were higher than that of WT, which further showed the application potential of M3 in the synthesis of chiral amines.

摘要

ω-转氨酶(ω-TA)是一种天然生物催化剂,在手性胺的合成中具有良好的应用潜力。然而,ω-TA在催化非天然底物过程中的稳定性差和活性低极大地阻碍了其应用。为了克服这些缺点,通过将分子动力学模拟辅助计算机辅助设计与随机和组合突变相结合,对来自[具体来源未给出]的()-ω-TA(TA)的热稳定性进行了改造。获得了一种具有同步增强的热稳定性和活性的最佳突变体TA-E104D/A246V/R266Q(M3)。与野生型(WT)酶相比,M3在35℃下的半衰期延长了4.8倍(从17.8分钟延长至102.7分钟),半失活温度()从38.1℃提高到40.3℃。M3对丙酮酸和1-()-苯乙胺的催化效率分别是WT的1.59倍和1.56倍。分子动力学模拟和分子对接表明,分子中氢键和疏水相互作用增加导致α-螺旋稳定性增强是酶热稳定性提高的主要原因。底物与周围氨基酸残基之间氢键的增强以及底物结合口袋的扩大有助于M3催化效率的提高。底物谱分析表明,M3对11种芳香酮的催化性能高于WT,这进一步显示了M3在手性胺合成中的应用潜力。

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