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乳腺癌中二硫键相关免疫检查点的枢纽基因。

Hub gene of disulfidptosis-related immune checkpoints in breast cancer.

机构信息

Department of Thoracic Surgery, Affiliated Hospital (Clinical College) of Xiangnan University, Chenzhou, 423000, Hunan Province, People's Republic of China.

Key Laboratory of Medical Imaging and Artifical Intelligence of Hunan Province, Chenzhou, 423000, People's Republic of China.

出版信息

Med Oncol. 2023 Jul 5;40(8):222. doi: 10.1007/s12032-023-02073-y.

Abstract

Disulfidptosis and immune checkpoint genes play an important role in tumor treatment. But there has been less research on the relationship between disulfidptosis and immune checkpoint of breast cancer. The objective of this study was to identify the hub genes of disulfidptosis- related immune checkpoints in breast cancer. We downloaded breast cancer expression data from The Cancer Genome Atlas database. The expression matrix of disulfidptosis-related immune checkpoints genes was established by mathematical method. A protein-protein interaction networks was established based on this expression matrix, and differential expression analysis was performed between normal and tumor samples. Additionally, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were performed to functionally annotate putative diferentially expressed genes. Two hub genes CD80 and CD276 were obtained by mathematical statistics and machine learning. Differential expression of these two genes, prognostic survival analysis, combined diagnostic ROC curve and immune results all showed that they were closely related to the occurrence, development and death of breast tumors. The results of this study open up a new way to explore immunotherapy for breast cancer.

摘要

二硫键蛋白病和免疫检查点基因在肿瘤治疗中起着重要作用。但对于乳腺癌中二硫键蛋白病和免疫检查点的关系研究较少。本研究旨在鉴定乳腺癌中二硫键蛋白病相关免疫检查点的枢纽基因。我们从癌症基因组图谱数据库下载了乳腺癌表达数据。通过数学方法建立了二硫键蛋白病相关免疫检查点基因的表达矩阵。基于该表达矩阵建立了蛋白质-蛋白质相互作用网络,并对正常和肿瘤样本之间进行差异表达分析。此外,还进行了基因本体论(GO)和京都基因与基因组百科全书(KEGG)通路分析,以对假定的差异表达基因进行功能注释。通过数学统计和机器学习获得了两个枢纽基因 CD80 和 CD276。这两个基因的差异表达、预后生存分析、联合诊断 ROC 曲线和免疫结果均表明它们与乳腺癌的发生、发展和死亡密切相关。本研究的结果为探索乳腺癌的免疫治疗开辟了新途径。

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