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一种用于开发基于 Cereblon E3 连接酶的部分 PROTAC 文库的模块化化学平台。

A Modular Chemistry Platform for the Development of a Cereblon E3 Ligase-Based Partial PROTAC Library.

机构信息

Lachman Institute for Pharmaceutical Development, School of Pharmacy, University of Wisconsin-Madison, 777 Highland Avenue, Madison, WI, 53705, USA.

Department of Chemistry, University of Wisconsin-Madison, 1101 University Avenue, Madison, WI 53706, USA.

出版信息

Chembiochem. 2023 Oct 17;24(20):e202300482. doi: 10.1002/cbic.202300482. Epub 2023 Aug 22.

DOI:10.1002/cbic.202300482
PMID:37418320
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10591699/
Abstract

Proteolysis targeting chimeras (PROTACs) are a promising therapeutic strategy to selectively promote the degradation of protein targets by exploiting the ubiquitin-proteasome system. Among the limited number of E3 ligase ligands discovered for the PROTAC technology, ligands of cereblon (CRBN) E3 ligase, such as pomalidomide, thalidomide, or lenalidomide, are the most frequently used for the development of PROTACs. Our group previously reported that a phenyl group could be tolerated on the C4-position of lenalidomide as the ligand of CRBN to develop PROTACs. Herein, we report a modular chemistry platform for the efficient attachment of various ortho-, meta-, and para-substituted phenyls to the C4-position of the lenalidomide via Suzuki cross-coupling reaction, which allows the systematic investigation of the linker effect for the development of PROTACs against any target. We examined the substrate scope by preparing twelve lenalidomide-derived CRBN E3 ligase ligands with different linkers.

摘要

蛋白水解靶向嵌合体(PROTACs)是一种很有前途的治疗策略,可利用泛素-蛋白酶体系统选择性地促进蛋白质靶标的降解。在 PROTAC 技术发现的有限数量的 E3 连接酶配体中,cereblon(CRBN)E3 连接酶的配体,如泊马度胺、沙利度胺或来那度胺,是最常用于开发 PROTACs 的配体。我们小组之前曾报道过,在 lenalidomide 的 C4 位上可以容忍苯环作为 CRBN 的配体来开发 PROTACs。在此,我们报告了一种模块化化学平台,可通过 Suzuki 交叉偶联反应将各种邻位、间位和对位取代的苯基高效地连接到 lenalidomide 的 C4 位上,从而可以系统地研究连接子效应对开发针对任何靶标的 PROTACs 的影响。我们通过制备具有不同连接子的十二个 lenalidomide 衍生的 CRBN E3 连接酶配体来检查底物范围。

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本文引用的文献

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J Med Chem. 2023 Feb 23;66(4):2904-2917. doi: 10.1021/acs.jmedchem.2c01941. Epub 2023 Feb 7.
2
Recent Advances in PROTACs for Drug Targeted Protein Research.蛋白水解靶向嵌合体(PROTACs)在药物靶向蛋白研究中的最新进展。
Int J Mol Sci. 2022 Sep 7;23(18):10328. doi: 10.3390/ijms231810328.
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Novel approaches for the rational design of PROTAC linkers.用于PROTAC连接子合理设计的新方法。
无水立体保留氟化物增强的免疫调节亚胺药物衍生物的铃木-宫浦偶联反应。
J Org Chem. 2024 Apr 5;89(7):4595-4606. doi: 10.1021/acs.joc.3c02873. Epub 2024 Mar 7.
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Development of Phenyl-substituted Isoindolinone- and Benzimidazole-type Cereblon Ligands for Targeted Protein Degradation.苯取代异吲哚啉酮和苯并咪唑型 cereblon 配体的开发用于靶向蛋白降解。
Chembiochem. 2024 Feb 16;25(4):e202300685. doi: 10.1002/cbic.202300685. Epub 2024 Jan 15.
Explor Target Antitumor Ther. 2020;1(5):381-390. doi: 10.37349/etat.2020.00023. Epub 2020 Oct 30.
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Current strategies for the design of PROTAC linkers: a critical review.PROTAC连接子设计的当前策略:批判性综述。
Explor Target Antitumor Ther. 2020;1(5):273-312. doi: 10.37349/etat.2020.00018. Epub 2020 Oct 30.
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Chem Soc Rev. 2022 May 10;51(9):3487-3534. doi: 10.1039/d2cs00148a.
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ACS Med Chem Lett. 2021 Oct 18;12(11):1733-1738. doi: 10.1021/acsmedchemlett.1c00368. eCollection 2021 Nov 11.
8
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