Kondo Hidehiro, Kamei Haruka, Murotani Fuyuka, Nozaki Reiko, Yazawa Ryosuke, Tani Reoto, Koiwai Keiichiro, Hirono Ikuo
Department of Marine Biosciences, Tokyo University of Marine Science and Technology, Konan 4-5-7, Minato-ku, Tokyo 108-8477, Japan.
Fish Shellfish Immunol Rep. 2023 Jun 17;5:100102. doi: 10.1016/j.fsirep.2023.100102. eCollection 2023 Dec 15.
We identified a novel immunoglobulin (Ig) heavy chain-like gene (tsIgH) expressed in the liver of the banded houndshark by preliminary transcriptomic analysis. The tsIgH gene showed less than 30% of amino acid identities to Ig genes of the shark. The gene encodes one variable domain (VH) and three conserved domains (CH1-CH3) with a predicted signal peptide. Interestingly, this protein has only one cysteine residue in a linker region between VH and CH1 other than those required for the formation of the immunoglobulin domain. Genome sequencing revealed that each of the domains was encoded by a corresponding single exon, and the exon-intron structures of the homologues are conserved in the other cartilaginous fishes. By RT-qPCR analysis, the transcript of the tsIgH gene was observed only in the liver, while that of the IgM was mainly detected in the epigonal organ, liver, and spleen. The novel Ig-heavy chain-like gene in cartilaginous fish may provide new clues to the evolution of immunoglobulin genes.
通过初步转录组分析,我们在带状猎狗鲨的肝脏中鉴定出一个新的免疫球蛋白(Ig)重链样基因(tsIgH)。tsIgH基因与鲨鱼的Ig基因的氨基酸同一性不到30%。该基因编码一个可变结构域(VH)和三个保守结构域(CH1-CH3),带有一个预测的信号肽。有趣的是,除了形成免疫球蛋白结构域所需的那些半胱氨酸残基外,这种蛋白质在VH和CH1之间的连接区域只有一个半胱氨酸残基。基因组测序表明,每个结构域由一个相应的单一外显子编码,并且同源物的外显子-内含子结构在其他软骨鱼类中是保守的。通过RT-qPCR分析,仅在肝脏中观察到tsIgH基因的转录本,而IgM的转录本主要在性腺器官、肝脏和脾脏中检测到。软骨鱼类中的这种新的Ig重链样基因可能为免疫球蛋白基因的进化提供新线索。