Li Min, He Peimin, Zhao Zitao, Liu Jinlin, Liu Hongtao, Ma Shaozu, Shen Yifei, Li Bin
School of Marine Ecology and Environment, Shanghai Ocean University, Shanghai, China.
Engineering Research Center for Water Environment Ecology in Shanghai, Shanghai, China.
Front Plant Sci. 2023 Jun 26;14:1203089. doi: 10.3389/fpls.2023.1203089. eCollection 2023.
(Linn.) Pall. is an important tourist resource and ecological restoration species in coastal wetlands. Environmental factors such as low temperature, darkness, phytohormone, salt stress and seawater flflooding, and light can induce betalain synthesis in , which plays an important role in plant adaptation to abiotic stress processes and in shaping the beautiful "red beach" landscape.
In this study, Illumina sequencing was used to profifile the transcriptome sequence (RNA-Seq) of leaves at different temperatures (5° C, 10°C, 15°C, 20°C, 25°C, and 30°C) and to validate differentially expressed genes (DEGs) indicated by real-time PCR (RT-qPCR).
The betacyanin content was highest in leaves at 15°C. Transcription group data showed that compared to the control group (15°C), the "betacyanin biosynthesis pathway" was signifificantly enriched in the fifive different temperature groups. KEGG analysis showed that the DEGs were mainly involved in pathways of phenylpropanoid biosynthesis, carbon fifixation in photosynthetic organisms, flflavonoid biosynthesis, and betacyanin biosynthesis. Among the key enzymes involved in biosynthesis of betacyanin, genes for tyrosinase, CYP76AD1 and 4,5-DOPA dioxygenase were signifificantly upregulated and most abundantly expressed at 15°C. It is possible that the gene for betacyanin synthesis from is primarily regulated by the MYB1R1 and MYB1 transcription factor. Four DEGs were randomly selected for quantitative PCR analysis, and DEG expression was generally consistent with the RNA-Seq data, verifying the validity of the transcriptome sequencing data.
Relative to other temperatures, 15°C was optimum for betacyanin synthesis, and this provides a theoretical reference for coastal wetland ecological remediation, reveals mechanisms of discoloration, and further mines its potential application for landscape vegetation.
(紫叶鸭跖草)是沿海湿地重要的旅游资源和生态修复物种。低温、黑暗、植物激素、盐胁迫、海水淹没和光照等环境因素可诱导紫叶鸭跖草中甜菜色素的合成,这在植物适应非生物胁迫过程及塑造美丽的“红海滩”景观中发挥着重要作用。
本研究利用Illumina测序对紫叶鸭跖草在不同温度(5℃、10℃、15℃、20℃、25℃和30℃)下的转录组序列(RNA-Seq)进行分析,并通过实时荧光定量PCR(RT-qPCR)验证差异表达基因(DEGs)。
紫叶鸭跖草叶片中甜菜青素含量在15℃时最高。转录组数据显示,与对照组(15℃)相比,“甜菜青素生物合成途径”在五个不同温度组中显著富集。KEGG分析表明,差异表达基因主要参与苯丙烷类生物合成、光合生物中的碳固定、类黄酮生物合成和甜菜青素生物合成途径。在参与甜菜青素生物合成的关键酶中,酪氨酸酶、CYP76AD1和4,5-二羟基苯丙氨酸双加氧酶基因在15℃时显著上调且表达量最高。紫叶鸭跖草中甜菜青素合成基因可能主要受MYB1R1和MYB1转录因子调控。随机选择四个差异表达基因进行定量PCR分析,差异表达基因的表达情况与RNA-Seq数据总体一致,验证了转录组测序数据的有效性。
相对于其他温度,15℃最适合紫叶鸭跖草甜菜青素的合成,这为沿海湿地生态修复提供了理论参考,揭示了紫叶鸭跖草变色机制,并进一步挖掘了其在景观植被方面的潜在应用。