Department of Science and Technology/National Research Foundation (DST-NRF) Centre of Excellence for Biomedical Tuberculosis Research, South African Medical Research Council Centre for Tuberculosis Research, Biomedical Research Institute, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa.
Centre for Cardiometabolic Research in Africa, Division of Medical Physiology, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa.
Front Immunol. 2023 Jul 3;14:1219097. doi: 10.3389/fimmu.2023.1219097. eCollection 2023.
Biomarkers predicting mortality among critical Coronavirus disease 2019 (COVID-19) patients provide insight into the underlying pathophysiology of fatal disease and assist with triaging of cases in overburdened settings. However, data describing these biomarkers in Sub-Saharan African populations are sparse.
We collected serum samples and corresponding clinical data from 87 patients with critical COVID-19 on day 1 of admission to the intensive care unit (ICU) of a tertiary hospital in Cape Town, South Africa, during the second wave of the COVID-19 pandemic. A second sample from the same patients was collected on day 7 of ICU admission. Patients were followed up until in-hospital death or hospital discharge. A custom-designed 52 biomarker panel was performed on the Luminex® platform. Data were analyzed for any association between biomarkers and mortality based on pre-determined functional groups, and individual analytes.
Of 87 patients, 55 (63.2%) died and 32 (36.8%) survived. We found a dysregulated cytokine response in patients who died, with elevated levels of type-1 and type-2 cytokines, chemokines, and acute phase reactants, as well as reduced levels of regulatory T cell cytokines. Interleukin (IL)-15 and IL-18 were elevated in those who died, and levels reduced over time in those who survived. Procalcitonin (PCT), C-reactive protein, Endothelin-1 and vascular cell adhesion molecule-1 were elevated in those who died.
These results show the pattern of dysregulation in critical COVID-19 in a Sub-Saharan African cohort. They suggest that fatal COVID-19 involved excessive activation of cytotoxic cells and the NLRP3 (nucleotide-binding domain, leucine-rich-containing family, pyrin domain-containing-3) inflammasome. Furthermore, superinfection and endothelial dysfunction with thrombosis might have contributed to mortality. HIV infection did not affect the outcome. A clinically relevant biosignature including PCT, pH and lymphocyte percentage on differential count, had an 84.8% sensitivity for mortality, and outperformed the Luminex-derived biosignature.
预测危重症 2019 年冠状病毒病(COVID-19)患者死亡率的生物标志物可深入了解致命疾病的潜在病理生理学,并有助于在资源超负荷的环境中对病例进行分类。然而,描述撒哈拉以南非洲人群中这些生物标志物的数据很少。
我们从南非开普敦一家三级医院的重症监护病房(ICU)入院的 87 例危重症 COVID-19 患者中收集了血清样本和相应的临床数据,这些患者是在 COVID-19 大流行的第二波期间入院的。从同一患者收集了 ICU 入院第 7 天的第二份样本。对患者进行随访,直至院内死亡或出院。在 Luminex®平台上进行了定制的 52 种生物标志物检测。根据预先确定的功能组和单个分析物,分析了生物标志物与死亡率之间的任何关联。
87 例患者中,55 例(63.2%)死亡,32 例(36.8%)存活。我们发现死亡患者的细胞因子反应失调,1 型和 2 型细胞因子、趋化因子和急性期反应物水平升高,调节性 T 细胞细胞因子水平降低。死亡患者的白细胞介素(IL)-15 和 IL-18 升高,存活患者的水平随时间降低。降钙素原(PCT)、C 反应蛋白、内皮素-1 和血管细胞黏附分子-1 在死亡患者中升高。
这些结果显示了撒哈拉以南非洲队列中危重症 COVID-19 的失调模式。它们表明,致命性 COVID-19 涉及细胞毒性细胞和 NLRP3(核苷酸结合域,富含亮氨酸重复序列,pyrin 结构域包含 3)炎性体的过度激活。此外,合并感染和内皮功能障碍伴血栓形成可能导致死亡。HIV 感染并未影响结局。包括 PCT、pH 和淋巴细胞百分比在内的具有临床相关性的生物标志物对死亡率的敏感性为 84.8%,优于 Luminex 衍生的生物标志物。