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利用基于分子指纹的筛选方法探索潜在的抗猴痘病毒细胞表面结合蛋白抑制剂的化学空间。

Exploring the chemical space for potential inhibitors against cell surface binding protein of Mpox virus using molecular fingerprint based screening approach.

机构信息

Department of Life Sciences, Presidency University, Kolkata, India.

出版信息

J Biomol Struct Dyn. 2024 Sep;42(14):7160-7173. doi: 10.1080/07391102.2023.2238087. Epub 2023 Jul 22.

Abstract

Mpox virus is the latest member of the Poxviridae family of which small pox virus is a member. Monekypox virus has led to thousands of infections across the globe. Poxvirus gains entry into the cell making use of glycosaminoglycans like chondroitin sulphate and heparan sulphate. The interaction of the Mpox virus protein E8L also called cell surface binding protein is crucial for host cell attachment, membrane fusion and viral entry into the host cell leading to establishment of infection thus making this protein a very attractive therapeutic target. In this study we have tried to utilize the chondroitin sulphate binding groove present in the protein and identify molecules which are structurally similar to chondroitin sulphate. These molecules can thus occupy the same pocket but with a better binding affinity than chondroitin sulphate in order to outcompete the latter molecule from binding to the E8L protein and thus prevent it from performing its function. This study may pave the way for development of highly efficient therapeutics against the Mpox virus and further curb its infective potential.Communicated by Ramaswamy H. Sarma.

摘要

猴痘病毒是痘病毒科的最新成员,天花病毒就是该科的成员之一。猴痘病毒已在全球导致数千例感染。痘病毒利用糖胺聚糖(如硫酸软骨素和硫酸乙酰肝素)进入细胞。猴痘病毒蛋白 E8L(也称为细胞表面结合蛋白)的相互作用对于宿主细胞附着、膜融合和病毒进入宿主细胞以建立感染至关重要,从而使该蛋白成为非常有吸引力的治疗靶标。在这项研究中,我们试图利用存在于该蛋白中的硫酸软骨素结合槽,并鉴定与硫酸软骨素在结构上相似的分子。这些分子因此可以占据相同的口袋,但与硫酸软骨素的结合亲和力更强,从而从与 E8L 蛋白的结合中竞争后者分子,并阻止其发挥功能。这项研究可能为开发针对猴痘病毒的高效治疗方法铺平道路,并进一步抑制其感染潜力。由 Ramaswamy H. Sarma 传达。

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