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通过计算药物设计方法,改性苦参碱成为抗猴痘和马尔堡病毒的新型治疗抑制剂。

Modified oxymatrine as novel therapeutic inhibitors against Monkeypox and Marburg virus through computational drug design approaches.

机构信息

Department of Pharmacy, Faculty of Allied Health Sciences, Daffodil International University, Ashulia, Dhaka, Bangladesh.

Department of Genetic Engineering and Biotechnology, University of Rajshahi, Rajshahi, Bangladesh.

出版信息

J Cell Mol Med. 2024 Sep;28(18):e70116. doi: 10.1111/jcmm.70116.

Abstract

Global impact of viral diseases specially Monkeypox (mpox) and Marburg virus, emphasizing the urgent need for effective drug interventions. Oxymatrine is an alkaloid which has been selected and modified using various functional groups to enhance its efficacy. The modifications were evaluated using various computatioanal analysis such as pass prediction, molecular docking, ADMET, and molecular dynamic simulation. Mpox and Marburg virus were chosen as target diseases based on their maximum pass prediction spectrum against viral disease. After that, molecular docking, dynamic simulation, DFT, calculation and ADMET prediction were determined. The main objective of this study was to enhance the efficacy of oxymatrine derivatives through functional group modifications and computational analyses to develop effective drug candidates against mpox and Marburg viruses. The calculated binding affinities indicated strong interactions against both mpox virus and Marburg virus. After that, the molecular dynamic simulation was conducted at 100 ns, which confirmed the stability of the binding interactions between the modified oxymatrine derivatives and target proteins. Then, the modified oxymatrine derivatives conducted theoretical ADMET profiling, which demonstrated their potential for effective drug development. Moreover, HOMO-LUMO calculation was performed to understand the chemical reactivity and physicochemical properties of compounds. This computational analysis indicated that modified oxymatrine derivatives for the treatment of mpox and Marburg virus suggested effective drug candidates based on their binding affinity, drug-like properties, stability and chemical reactivity. However, further experimental validation is necessary to confirm their clinical value and efficacy as therapeutic candidates.

摘要

全球病毒疾病的影响,特别是猴痘(mpox)和马尔堡病毒,强调了迫切需要有效的药物干预。氧化苦参碱是一种生物碱,已通过各种官能团进行选择和修饰,以提高其功效。使用各种计算分析(如通过预测、分子对接、ADMET 和分子动力学模拟)评估修饰效果。选择猴痘和马尔堡病毒作为目标疾病,是基于它们对病毒疾病的最大通过预测谱。之后,进行了分子对接、动态模拟、DFT、计算和 ADMET 预测。本研究的主要目的是通过官能团修饰和计算分析来提高氧化苦参碱衍生物的功效,开发针对猴痘和马尔堡病毒的有效药物候选物。计算得到的结合亲和力表明,这些化合物与两种病毒都具有强烈的相互作用。之后,进行了 100ns 的分子动力学模拟,证实了修饰后的氧化苦参碱衍生物与靶蛋白之间结合相互作用的稳定性。然后,对修饰后的氧化苦参碱衍生物进行了理论上的 ADMET 分析,表明它们具有有效的药物开发潜力。此外,进行了 HOMO-LUMO 计算,以了解化合物的化学反应性和物理化学性质。该计算分析表明,修饰后的氧化苦参碱衍生物可能是治疗猴痘和马尔堡病毒的有效药物候选物,因为它们具有结合亲和力、类药性、稳定性和化学反应性。然而,仍需要进一步的实验验证来确认它们作为治疗候选物的临床价值和疗效。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/afd6/11437895/2312af853c62/JCMM-28-e70116-g002.jpg

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