Lv Min-Yi, Cai Du, Li Cheng-Hang, Chen Junguo, Li Guanman, Hu Chuling, Gai Baowen, Lei Jiaxin, Lan Ping, Wu Xiaojian, He Xiaosheng, Gao Feng
Department of Genaral Surgery (Colorectal Surgery) The Sixth Affiliated Hospital Sun Yat-sen University Guangzhou China.
Guangdong Provincial Key Laboratory of Colorectal and Pelvic Floor Disease The Sixth Affiliated Hospital, Sun Yat-sen University Guangzhou China.
MedComm (2020). 2023 Jul 26;4(4):e333. doi: 10.1002/mco2.333. eCollection 2023 Aug.
Cellular senescence has been listed as a hallmark of cancer, but its role in colorectal cancer (CRC) remains unclear. We comprehensively evaluated the transcriptome, genome, digital pathology, and clinical data from multiple datasets of CRC patients and proposed a novel senescence subtype for CRC. Multi-omics data was used to analyze the biological features, tumor microenvironment, and mutation landscape of senescence subtypes, as well as drug sensitivity and immunotherapy response. The senescence score was constructed to better quantify senescence in each patient for clinical use. Unsupervised learning revealed three transcriptome-based senescence subtypes. Cluster 1, characterized by low senescence and activated proliferative pathways, was sensitive to chemotherapeutic drugs. Cluster 2, characterized by intermediate senescence and high immune infiltration, exhibited significant immunotherapeutic advantages. Cluster 3, characterized by high senescence, high immune, and stroma infiltration, had a worse prognosis and maybe benefit from targeted therapy. We further constructed a senescence scoring system based on seven senescent genes through machine learning. Lower senescence scores were highly predictive of longer disease-free survival, and patients with low senescence scores may benefit from immunotherapy. We proposed the senescence subtypes of CRC and our findings provide potential treatment interventions for each CRC senescence subtype to promote precision treatment.
细胞衰老已被列为癌症的一个标志,但其在结直肠癌(CRC)中的作用仍不清楚。我们全面评估了来自CRC患者多个数据集的转录组、基因组、数字病理学和临床数据,并提出了一种新的CRC衰老亚型。多组学数据用于分析衰老亚型的生物学特征、肿瘤微环境、突变格局以及药物敏感性和免疫治疗反应。构建衰老评分以更好地量化每位患者的衰老情况以供临床使用。无监督学习揭示了三种基于转录组的衰老亚型。第1组以低衰老和激活的增殖途径为特征,对化疗药物敏感。第2组以中等衰老和高免疫浸润为特征,具有显著的免疫治疗优势。第3组以高衰老、高免疫和基质浸润为特征,预后较差,可能从靶向治疗中获益。我们通过机器学习进一步构建了基于七个衰老基因的衰老评分系统。较低的衰老评分高度预测更长的无病生存期,衰老评分低的患者可能从免疫治疗中获益。我们提出了CRC的衰老亚型,我们的发现为每种CRC衰老亚型提供了潜在的治疗干预措施,以促进精准治疗。