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中性力量与平衡选择相互作用塑造内蒙古仓鼠主要组织相容性复合体空间模式:暗示广泛的局部适应。

Neutral Forces and Balancing Selection Interplay to Shape the Major Histocompatibility Complex Spatial Patterns in the Striped Hamster in Inner Mongolia: Suggestive of Broad-Scale Local Adaptation.

机构信息

National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China.

School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan 250012, China.

出版信息

Genes (Basel). 2023 Jul 22;14(7):1500. doi: 10.3390/genes14071500.

DOI:10.3390/genes14071500
PMID:37510404
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10379431/
Abstract

BACKGROUND

The major histocompatibility complex (MHC) plays a key role in the adaptive immune response to pathogens due to its extraordinary polymorphism. However, the spatial patterns of MHC variation in the striped hamster remain unclear, particularly regarding the relative contribution of the balancing selection in shaping MHC spatial variation and diversity compared to neutral forces.

METHODS

In this study, we investigated the immunogenic variation of the striped hamster in four wild populations in Inner Mongolia which experience a heterogeneous parasitic burden. Our goal was to identify local adaptation by comparing the genetic structure at the MHC with that at seven microsatellite loci, taking into account neutral processes.

RESULTS

We observed significant variation in parasite pressure among sites, with parasite burden showing a correlation with temperature and precipitation. Molecular analysis revealed a similar co-structure between MHC and microsatellite loci. We observed lower genetic differentiation at MHC loci compared to microsatellite loci, and no correlation was found between the two.

CONCLUSIONS

Overall, these results suggest a complex interplay between neutral evolutionary forces and balancing selection in shaping the spatial patterns of MHC variation. Local adaptation was not detected on a small scale but may be applicable on a larger scale.

摘要

背景

主要组织相容性复合体(MHC)因其极高的多态性,在病原体的适应性免疫反应中起着关键作用。然而,条纹仓鼠 MHC 变异的空间模式仍不清楚,特别是在平衡选择相对于中性力量塑造 MHC 空间变异和多样性方面的相对贡献。

方法

本研究在内蒙古的四个野生种群中调查了条纹仓鼠的免疫原性变异,这些种群经历着不均匀的寄生虫负担。我们的目标是通过比较 MHC 与七个微卫星位点的遗传结构,同时考虑中性过程,来识别局部适应。

结果

我们观察到不同地点的寄生虫压力存在显著差异,寄生虫负担与温度和降水呈正相关。分子分析表明 MHC 和微卫星位点之间存在相似的共结构。我们观察到 MHC 基因座的遗传分化程度低于微卫星基因座,并且两者之间没有相关性。

结论

总体而言,这些结果表明中性进化力量和平衡选择在塑造 MHC 变异的空间模式方面存在复杂的相互作用。在小范围内没有检测到局部适应,但在更大范围内可能适用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9f/10379431/e2e0da974048/genes-14-01500-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9f/10379431/12deea906f2c/genes-14-01500-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9f/10379431/593f86a968e5/genes-14-01500-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9f/10379431/f53338822680/genes-14-01500-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9f/10379431/72842b314eeb/genes-14-01500-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9f/10379431/dc5c32427d6d/genes-14-01500-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9f/10379431/e2e0da974048/genes-14-01500-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9f/10379431/12deea906f2c/genes-14-01500-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9f/10379431/593f86a968e5/genes-14-01500-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9f/10379431/f53338822680/genes-14-01500-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9f/10379431/72842b314eeb/genes-14-01500-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9f/10379431/dc5c32427d6d/genes-14-01500-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e9f/10379431/e2e0da974048/genes-14-01500-g006.jpg

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