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大凤头鹈鹕地中海种群的 MHC Ⅱ B 类高度多样性,无空间分化。

Very high MHC Class IIB diversity without spatial differentiation in the mediterranean population of greater Flamingos.

机构信息

University of Ulm, Institute of Evolutionary Ecology and Conservation Genomics, Albert-Einstein Allee 11, D-89069, Ulm, Germany.

Université de Bourgogne, Equipe Ecologie Evolutive, UMR CNRS 6282 Biogéosciences, 6 bd. Gabriel, 21000, Dijon, France.

出版信息

BMC Evol Biol. 2017 Feb 20;17(1):56. doi: 10.1186/s12862-017-0905-3.

Abstract

BACKGROUND

Selective pressure from pathogens is thought to shape the allelic diversity of major histocompatibility complex (MHC) genes in vertebrates. In particular, both local adaptation to pathogens and gene flow are thought to explain a large part of the intraspecific variation observed in MHC allelic diversity. To date, however, evidence that adaptation to locally prevalent pathogens maintains MHC variation is limited to species with limited dispersal and, hence, reduced gene flow. On the one hand high gene flow can disrupt local adaptation in species with high dispersal rates, on the other hand such species are much more likely to experience spatial variation in pathogen pressure, suggesting that there may be intense pathogen mediated selection pressure operating across breeding sites in panmictic species. Such pathogen mediated selection pressure operating across breeding sites should therefore be sufficient to maintain high MHC diversity in high dispersing species in the absence of local adaptation mechanisms. We used the Greater Flamingo, Phoenicopterus roseus, a long-lived colonial bird showing a homogeneous genetic structure of neutral markers at the scale of the Mediterranean region, to test the prediction that higher MHC allelic diversity with no population structure should occur in large panmictic populations of long-distance dispersing birds than in other resident species.

RESULTS

We assessed the level of allelic diversity at the MHC Class IIB exon 2 from 116 individuals born in four different breeding colonies of Greater Flamingo in the Mediterranean region. We found one of the highest allelic diversity (109 alleles, 2 loci) of any non-passerine avian species investigated so far relative to the number of individuals and loci genotyped. There was no evidence of population structure between the four major Mediterranean breeding colonies.

CONCLUSION

Our results suggest that local adaptation at MHC Class IIB in Greater Flamingos is constrained by high gene flow and high MHC diversity appears to be maintained by population wide pathogen-mediated selection rather than local pathogen-mediated selection. Further understanding of how pathogens vary across space and time will be crucial to further elucidate the mechanisms maintaining MHC diversity in species with large panmictic populations and high dispersal rates.

摘要

背景

病原体的选择压力被认为塑造了脊椎动物主要组织相容性复合体(MHC)基因的等位基因多样性。特别是,局部适应病原体和基因流动都被认为可以解释 MHC 等位基因多样性观察到的种内变异的很大一部分。然而,迄今为止,适应当地流行病原体维持 MHC 变异的证据仅限于扩散能力有限、因此基因流动减少的物种。一方面,高基因流动可以破坏高扩散率物种的局部适应,另一方面,这些物种更有可能经历病原体压力的空间变化,这表明在杂种物种的繁殖地之间可能存在强烈的病原体介导的选择压力。在缺乏局部适应机制的情况下,这种在繁殖地之间运作的病原体介导的选择压力应该足以维持高扩散率物种的 MHC 多样性。我们使用火烈鸟,Phoenicopterus roseus,一种在地中海地区显示中性标记均匀遗传结构的长寿命群居鸟类,来检验以下预测:在具有远距离扩散能力的大型混合种群中,与其他留居物种相比,MHC 等位基因多样性更高且没有种群结构。

结果

我们评估了地中海地区四个不同繁殖地的 116 只火烈鸟个体 MHC 类 IIB 外显子 2 的等位基因多样性水平。与已研究的任何非雀形目鸟类物种相比,我们发现其具有最高的等位基因多样性之一(109 个等位基因,2 个位点),相对于个体和基因座的数量。四个主要地中海繁殖地之间没有种群结构的证据。

结论

我们的结果表明,火烈鸟 MHC 类 IIB 的局部适应受到高基因流动的限制,高 MHC 多样性似乎是由群体病原体介导的选择而不是局部病原体介导的选择来维持的。进一步了解病原体如何随时间和空间变化,对于进一步阐明具有大型混合种群和高扩散率的物种维持 MHC 多样性的机制至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c78/5319168/17b6adcbaa2b/12862_2017_905_Fig1_HTML.jpg

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