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与 多应激反应的比较转录组学

Comparative Transcriptomics of Multi-Stress Responses in and .

机构信息

School of Natural Sciences, Massey University, Tennent Drive, Palmerston North 4474, New Zealand.

Department Molecular Biology, Institute of Biochemistry and Biology, University of Potsdam, Karl-Liebknecht-Straße 24-25, Haus 20, 14476 Potsdam, Germany.

出版信息

Int J Mol Sci. 2023 Jul 11;24(14):11323. doi: 10.3390/ijms241411323.

Abstract

The environment is seldom optimal for plant growth and changes in abiotic and biotic signals, including temperature, water availability, radiation and pests, induce plant responses to optimise survival. The New Zealand native plant species and close relative to , grows under environmental conditions that are unsustainable for many plant species. Here, we compare the responses of both species to different stressors (low temperature, salt and UV-B radiation) to help understand how can grow in such harsh environments. The stress transcriptomes were determined and comparative transcriptome and network analyses discovered similar and unique responses within species, and between the two plant species. A number of widely studied plant stress processes were highly conserved in and . However, in response to cold stress, Gene Ontology terms related to glycosinolate metabolism were only enriched in . Salt stress was associated with alteration of the cuticle and proline biosynthesis in and , respectively. Anthocyanin production may be a more important strategy to contribute to the UV-B radiation tolerance in . These results allowed us to define broad stress response pathways in and and suggested that regulation of glycosinolate, proline and anthocyanin metabolism are strategies that help mitigate environmental stress.

摘要

环境很少是植物生长的最佳条件,非生物和生物信号的变化,包括温度、水分供应、辐射和害虫,都会诱导植物做出反应以优化生存。新西兰本地植物物种是 的近亲,生长在许多植物物种无法持续生存的环境条件下。在这里,我们比较了这两个物种对不同胁迫(低温、盐和 UV-B 辐射)的反应,以帮助了解 如何在如此恶劣的环境中生长。确定了胁迫转录组,并进行了比较转录组和网络分析,发现了物种内和两个植物物种之间的相似和独特反应。许多广泛研究的植物应激过程在 和 中高度保守。然而,在应对寒冷胁迫时,与糖昔代谢相关的基因本体术语仅在 中富集。盐胁迫分别与 角质层和脯氨酸生物合成的改变有关。类黄酮的产生可能是一种更重要的策略,有助于提高 对 UV-B 辐射的耐受性。这些结果使我们能够在 和 中定义广泛的应激反应途径,并表明糖昔、脯氨酸和类黄酮代谢的调节是帮助减轻环境应激的策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/192f/10379395/2dbaf827fb6c/ijms-24-11323-g001.jpg

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