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探索基因组减毒株在质粒 DNA 生产中的潜力。

Exploring the Potential of a Genome-Reduced Strain for Plasmid DNA Production.

机构信息

Department of Biological Sciences, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 34141, Republic of Korea.

Department of Biotechnology, NTT Hi-Tech Institute, Nguyen Tat Thanh University (NTTU), Ho Chi Minh City 700000, Vietnam.

出版信息

Int J Mol Sci. 2023 Jul 21;24(14):11749. doi: 10.3390/ijms241411749.

Abstract

The global demand for nucleic acid-based vaccines, including plasmid DNA (pDNA) and mRNA vaccines, needs efficient production platforms. However, conventional hosts for plasmid production have encountered challenges related to sequence integrity due to the presence of insertion sequences (ISs). In this study, we explored the potential of a genome-reduced as a host for pDNA production. This strain had been constructed by removing approximately 23% of the genome which were unessential genes, including the genomic unstable elements. Moreover, the strain exhibits an elevated level of NADPH, a coenzyme known to increase plasmid production according to a mathematical model. We hypothesized that the combination of genome reduction and the abundance of NADPH would significantly enhance pDNA production capabilities. Remarkably, our results confirmed a three-fold increase in pDNA production compared to the widely employed DH5α strain. Furthermore, the genome-reduced strain exhibited heightened sensitivity to various antibiotics, bolstering its potential for large scale industrial pDNA production. These findings suggest the genome-reduced as an exciting candidate for revolutionizing the pDNA industry, offering unprecedented efficiency and productivity.

摘要

全球对基于核酸的疫苗(包括质粒 DNA(pDNA)和 mRNA 疫苗)的需求需要高效的生产平台。然而,由于插入序列(IS)的存在,传统的质粒生产宿主在序列完整性方面遇到了挑战。在这项研究中,我们探索了基因组减少的作为 pDNA 生产宿主的潜力。该菌株通过去除约 23%的基因组,包括基因组不稳定元件,构建而成,这些基因组是非必需基因。此外,根据数学模型,该菌株表现出高水平的 NADPH,一种已知可增加质粒产量的辅酶。我们假设基因组减少和 NADPH 的丰度的结合将显著增强 pDNA 的生产能力。值得注意的是,我们的结果证实与广泛使用的 DH5α 菌株相比,pDNA 的产量增加了三倍。此外,基因组减少的菌株对各种抗生素表现出更高的敏感性,这增强了其用于大规模工业 pDNA 生产的潜力。这些发现表明基因组减少的作为 pDNA 行业的革命性候选者,提供了前所未有的效率和生产力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/60ba/10380479/11476768899a/ijms-24-11749-g001.jpg

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