Suppr超能文献

通过高通量测序对卵巢过度刺激综合征患者进行外周血转录组分析。

Peripheral blood transcriptome analysis of patients with ovarian hyperstimulation syndrome through high-throughput sequencing.

作者信息

Yan Bo, Wu Bin, Wang Zhi-Qiang, Wei Yan, Ni Ya-Li

机构信息

Reproductive Medicine Center, Gansu Provincial Maternity and Child-Care Hospital, Lanzhou 730050, China.

Reproductive Medicine Department, Central Hospital Affiliated to Shandong First Medical University, Jinan 250000, China.

出版信息

Reprod Dev Med. 2023 Jun;7(2):115-121. doi: 10.1097/RD9.0000000000000058. Epub 2023 Jan 3.

Abstract

UNLABELLED

Ovarian hyperstimulation syndrome (OHSS) is a frequent iatrogenic complication that arises during assisted reproduction and accounts for approximately 30% of all fertilization cycles. Using high-throughput sequencing, we investigated the peripheral blood transcriptome of patients with OHSS.

METHODS

Peripheral blood samples were obtained from 15 patients in each of the OHSS high-risk and low-risk groups on the ovum pick-up day. Subsequently, high-throughput sequencing was used to obtain the peripheral blood transcriptomes of five patients each from the high- and low-risk groups. Bioinformatic tools were used for mRNA expression profile mapping and screening of differentially expressed genes (DEGs). Bioinformatics techniques were also implemented in the Kyoto Encyclopedia of Genes Genomes (KEGG) signal pathway, Gene Ontology (GO) function, and protein-protein interaction (PPI) network analyses of DEGs.

RESULTS

A total of 20,031 genes were identified and 148 were found to be differentially expressed (0.05, |logFC| > 0.58), with 52 upregulated and 96 downregulated genes. GO and KEGG analyses indicated that these genes were involved in extracellular corpuscles (GO: 0070062), plasma membrane (GO: 0005886), extracellular regions (GO: 0005576), immune system response (GO: 0006955), PI3K-Akt signaling pathways (hsa04151), cell adhesion molecules (CAMs, hsa04514), focal adhesion (hsa04510), and complement and coagulation cascades (hsa04610). The PPI network and realtime fluorescence quantitative polymerase chain reaction (qPCR) verification predicted that complement C3, von Willebrand factor, and vascular cell adhesion protein 1 proteins are highly implicated in OHSS and may serve as potential biomarkers for future OHSS studies.

CONCLUSION

Transcriptome analysis revealed several DEGs related to OHSS risk factors in the peripheral blood, indicating that these DEGs may be novel players in OHSS development.

摘要

未标注

卵巢过度刺激综合征(OHSS)是辅助生殖过程中常见的医源性并发症,约占所有受精周期的30%。我们采用高通量测序技术研究了OHSS患者的外周血转录组。

方法

在取卵日从OHSS高风险组和低风险组的15名患者中采集外周血样本。随后,使用高通量测序技术分别获取高风险组和低风险组各5名患者的外周血转录组。利用生物信息学工具进行mRNA表达谱绘制和差异表达基因(DEG)筛选。还运用生物信息学技术对DEG进行京都基因与基因组百科全书(KEGG)信号通路、基因本体论(GO)功能和蛋白质-蛋白质相互作用(PPI)网络分析。

结果

共鉴定出20,031个基因,其中148个基因差异表达(P<0.05,|logFC|>0.58),上调基因52个,下调基因96个。GO和KEGG分析表明,这些基因参与细胞外小体(GO:0070062)、质膜(GO:0005886)、细胞外区域(GO:0005576)、免疫系统反应(GO:0006955)、PI3K-Akt信号通路(hsa04151)、细胞黏附分子(CAMs,hsa04514)、黏着斑(hsa04510)以及补体和凝血级联反应(hsa04610)。PPI网络和实时荧光定量聚合酶链反应(qPCR)验证预测补体C3、血管性血友病因子和血管细胞黏附蛋白1与OHSS高度相关,可能作为未来OHSS研究的潜在生物标志物。

结论

转录组分析揭示了外周血中几个与OHSS危险因素相关的DEG,表明这些DEG可能是OHSS发生发展中的新参与者。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/846a/10241322/d28350aeb9c9/rd9-7-115-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验