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(伞形目:伞形科)的完整线粒体基因组及系统发育分析。

The complete mitochondrial genome of (Apiales: Apiaceae) and phylogenetic analysis.

作者信息

Chen Ge, Kang Ruiping, Wang Zihao, Jiang Yu, Zhou Huiying, Abuduaini Aifeire, Suo Feiya, Huang Luodong

机构信息

College of Life Science and Technology, Guangxi University, Nanning, Guangxi, China.

College of Life Science and Technology, Xinjiang University, Urumchi, Xinjiang, China.

出版信息

Mitochondrial DNA B Resour. 2023 Jul 27;8(7):760-765. doi: 10.1080/23802359.2023.2238357. eCollection 2023.

DOI:10.1080/23802359.2023.2238357
PMID:37521907
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10375935/
Abstract

Cumin ( L). belongs to the family Apiaceae and the order Apiales, which is a widely grown spice and medicinal plant in Xinjiang province, China. In the current study, whole genome sequencing of was performed using the Illumina HiSeq 4000 platform, and the complete mitogenome sequence was assembled and annotated. We found that the single circular mitogenome of was 246,721 bp in length, and has about 45.5% GC content. It comprised 73 genes in the coding region (35 protein-coding genes, 18 tRNA genes, 3 rRNA genes, and 15 open-reading frames) and a non-coding region. Phylogenetic analysis indicated that is closely related to and the subtribes . The mitogenome of revealed its phylogenetic relationships with other species in the Apiaceae family, which would further help in understanding its evolution.

摘要

孜然(L.)属于伞形科和伞形目,是中国新疆广泛种植的香料和药用植物。在本研究中,使用Illumina HiSeq 4000平台对其进行了全基因组测序,并对完整的线粒体基因组序列进行了组装和注释。我们发现孜然的单环线粒体基因组长度为246,721 bp,GC含量约为45.5%。它在编码区包含73个基因(35个蛋白质编码基因、18个tRNA基因、3个rRNA基因和15个开放阅读框)以及一个非编码区。系统发育分析表明,孜然与[具体物种]和[具体亚族]密切相关。孜然的线粒体基因组揭示了它与伞形科其他物种的系统发育关系,这将进一步有助于理解其进化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d15c/10375935/40f260a1e228/TMDN_A_2238357_F0003_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d15c/10375935/7de923e75e7d/TMDN_A_2238357_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d15c/10375935/5df78911b5e2/TMDN_A_2238357_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d15c/10375935/40f260a1e228/TMDN_A_2238357_F0003_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d15c/10375935/7de923e75e7d/TMDN_A_2238357_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d15c/10375935/5df78911b5e2/TMDN_A_2238357_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d15c/10375935/40f260a1e228/TMDN_A_2238357_F0003_C.jpg

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