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Garcinolic Acid 区分 GACKIX 结构域并调节相互作用网络。

Garcinolic Acid Distinguishes Between GACKIX Domains and Modulates Interaction Networks.

机构信息

Life Sciences Institute, University of Michigan, 210 Washtenaw Avenue, Ann Arbor, MI-48109, USA.

Program in Chemical Biology, Life Sciences Institute, University of Michigan, 210 Washtenaw Avenue, Ann Arbor, MI-48109, USA.

出版信息

Chembiochem. 2023 Nov 2;24(21):e202300439. doi: 10.1002/cbic.202300439. Epub 2023 Sep 7.

DOI:10.1002/cbic.202300439
PMID:37525583
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10870240/
Abstract

Natural products are often uniquely suited to modulate protein-protein interactions (PPIs) due to their architectural and functional group complexity relative to synthetic molecules. Here we demonstrate that the natural product garcinolic acid allosterically blocks the CBP/p300 KIX PPI network and displays excellent selectivity over related GACKIX motifs. It does so via a strong interaction (K 1 μM) with a non-canonical binding site containing a structurally dynamic loop in CBP/p300 KIX. Garcinolic acid engages full-length CBP in the context of the proteome and in doing so effectively inhibits KIX-dependent transcription in a leukemia model. As the most potent small-molecule KIX inhibitor yet reported, garcinolic acid represents an important step forward in the therapeutic targeting of CBP/p300.

摘要

天然产物通常因其结构和官能团的复杂性相对于合成分子而特别适合调节蛋白质-蛋白质相互作用(PPIs)。在这里,我们证明天然产物 Garcinol 酸别构地阻断 CBP/p300 KIX PPI 网络,并显示出对相关 GACKIX 基序的优异选择性。它通过与包含 CBP/p300 KIX 中结构动态环的非典型结合位点的强相互作用(K 1 μM)来实现这一点。Garcinol 酸在蛋白质组的背景下与全长 CBP 结合,并在白血病模型中有效抑制 KIX 依赖性转录。作为迄今为止报道的最有效的小分子 KIX 抑制剂,Garcinol 酸代表了在 CBP/p300 的治疗靶向方面向前迈出的重要一步。

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PLoS Comput Biol. 2022 Apr 22;18(4):e1009977. doi: 10.1371/journal.pcbi.1009977. eCollection 2022 Apr.
2
A Dual-Site Inhibitor of CBP/p300 KIX is a Selective and Effective Modulator of Myb.CBP/p300 KIX 的双位点抑制剂是一种选择性和有效的 Myc 调节子。
J Am Chem Soc. 2021 Sep 22;143(37):15056-15062. doi: 10.1021/jacs.1c04432. Epub 2021 Sep 7.
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Structure of the SARS-CoV-2 Nsp1/5'-Untranslated Region Complex and Implications for Potential Therapeutic Targets, a Vaccine, and Virulence.
严重急性呼吸综合征冠状病毒2(SARS-CoV-2)非结构蛋白1/5'-非翻译区复合物的结构及其对潜在治疗靶点、疫苗和毒力的影响
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Inhibitors of protein-protein interactions (PPIs): an analysis of scaffold choices and buried surface area.蛋白质-蛋白质相互作用(PPIs)抑制剂:支架选择和埋藏表面积分析。
Curr Opin Chem Biol. 2018 Jun;44:75-86. doi: 10.1016/j.cbpa.2018.06.004. Epub 2018 Jun 13.
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Identification of small molecule inhibitors of the Chikungunya virus nsP1 RNA capping enzyme.鉴定基孔肯雅病毒 nsP1 RNA 加帽酶的小分子抑制剂。
Antiviral Res. 2018 Jun;154:124-131. doi: 10.1016/j.antiviral.2018.03.013. Epub 2018 Apr 20.
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Dual Labeling of the CBP/p300 KIX Domain for F NMR Leads to Identification of a New Small-Molecule Binding Site.CBP/p300 KIX 结构域的双重标记用于 F NMR 导致新的小分子结合位点的鉴定。
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Angew Chem Int Ed Engl. 2015 Mar 16;54(12):3735-9. doi: 10.1002/anie.201411658. Epub 2015 Feb 4.