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采用多重实时聚合酶链反应方法的蜱传病原体筛查。

Tick-Borne Pathogens Screening Using a Multiplex Real-Time Polymerase Chain Reaction-Based Method.

机构信息

Molecular Medicine Laboratory, Unidad Académica de Medicina Humana y Ciencias de la Salud, Universidad Autónoma de Zacatecas, Zacatecas, 98160, México.

Orthopedics and Traumatology Service, Facultad de Medicina y Hospital Universitario 'Dr. José E. González', Universidad Autónoma de Nuevo León, Monterrey, Nuevo León, 64460, México.

出版信息

Acta Parasitol. 2023 Sep;68(3):705-710. doi: 10.1007/s11686-023-00702-0. Epub 2023 Aug 2.

Abstract

PURPOSE

This study aims to develop and evaluate a cost-effective, user-friendly multiplex quantitative real-time polymerase chain reaction (qPCR) method for detecting multiple tick-borne pathogens associated with human and veterinary diseases.

METHODS

In silico PCR was performed to design and evaluate primer sequences reported for amplifying Rickettsia spp., Borrelia spp., and Ehrlichia spp. Single and multiplex qPCR assays were then standardized to detect individual pathogens and multiple pathogens in a single reaction. Positive controls were generated to determine the dynamic range of the methods. In the validation phase, a total of 800 samples were screened for the presence of tick-borne pathogens.

RESULTS

Identification in a single qPCR reaction (multiplex) of Ehrlichia spp., and Borrelia spp. with a limit of detection of 10 copies and Rickettsia spp. with 100 copies, a PCR efficiency (E) of 90-100% and a coefficient of correlation (R) of 0.998-0.996 for all pathogens.

CONCLUSION

The ability to detect three significant pathogens (Ehrlichia spp., Rickettsia spp., and Borrelia spp.) in a single qPCR reaction offers a significant advantage in the field of molecular diagnostics for tick-borne diseases. This advancement has a profound impact on public health as it facilitates the selection of appropriate treatment protocols, thereby reducing complications associated with disease progression. The streamlined approach provided by this method simplifies the diagnostic process and enables timely intervention, ultimately improving patient outcomes and mitigating the potential risks associated with untreated or misdiagnosed tick-borne infections.

摘要

目的

本研究旨在开发和评估一种经济高效、用户友好的多重实时聚合酶链反应(qPCR)方法,用于检测与人类和兽医疾病相关的多种蜱传病原体。

方法

通过计算机分析进行 PCR,设计并评估已报道的用于扩增立克次体属、螺旋体属和埃立克体属的引物序列。然后,对单重和多重 qPCR 检测进行标准化,以在单次反应中检测单个病原体和多种病原体。生成阳性对照以确定方法的动态范围。在验证阶段,总共筛选了 800 个样本以检测蜱传病原体的存在。

结果

在单个 qPCR 反应(多重)中鉴定出埃立克体属、螺旋体属,检测限为 10 拷贝,立克次体属为 100 拷贝,PCR 效率(E)为 90-100%,所有病原体的相关系数(R)为 0.998-0.996。

结论

在单个 qPCR 反应中同时检测三种重要病原体(埃立克体属、立克次体属和螺旋体属)的能力在蜱传疾病的分子诊断领域具有显著优势。这一进展对公共卫生产生了深远影响,因为它有助于选择适当的治疗方案,从而减少与疾病进展相关的并发症。该方法提供的简化方法简化了诊断过程,并能够及时干预,最终改善患者的结果并减轻未经治疗或误诊的蜱传感染的潜在风险。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cff8/10462521/0773dde468d0/11686_2023_702_Fig1_HTML.jpg

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